dbCAN Logo

Cluster: HRGMv2_3869_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3869_13 HRGMv2_3869_13_30 58539 61826 + 1.B.14.6.1
pfam HRGMv2_3869_13 HRGMv2_3869_13_31 61846 63324 + SusD_RagB | SusD-like_3
pfam HRGMv2_3869_13 HRGMv2_3869_13_32 63357 64790 + Fasciclin | Fasciclin
TC HRGMv2_3869_13 HRGMv2_3869_13_33 64812 67814 + 1.B.14.6.13
TC HRGMv2_3869_13 HRGMv2_3869_13_34 67831 69366 + 8.A.46.1.4
CAZyme HRGMv2_3869_13 HRGMv2_3869_13_35 69388 71334 + GH33
pfam HRGMv2_3869_13 HRGMv2_3869_13_36 71360 72964 + Calx-beta | Calx-beta | Calx-beta
peptidase HRGMv2_3869_13 HRGMv2_3869_13_37 72978 75749 + S08.UPA
TC HRGMv2_3869_13 HRGMv2_3869_13_38 75780 76730 + 1.B.57.4.3
Gene ID: HRGMv2_3869_13_30
Type: TC
Location: 58539 - 61826 (+)
Gene ID: HRGMv2_3869_13_31
Type: pfam
Location: 61846 - 63324 (+)
Gene ID: HRGMv2_3869_13_32
Type: pfam
Location: 63357 - 64790 (+)
Gene ID: HRGMv2_3869_13_33
Type: TC
Location: 64812 - 67814 (+)
Gene ID: HRGMv2_3869_13_34
Type: TC
Location: 67831 - 69366 (+)
Gene ID: HRGMv2_3869_13_35
Type: CAZyme
Location: 69388 - 71334 (+)
Gene ID: HRGMv2_3869_13_36
Type: pfam
Location: 71360 - 72964 (+)
Gene ID: HRGMv2_3869_13_37
Type: peptidase
Location: 72978 - 75749 (+)
Gene ID: HRGMv2_3869_13_38
Type: TC
Location: 75780 - 76730 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List