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Cluster: HRGMv2_3869_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3869_11 HRGMv2_3869_11_82 107999 109237 + GT4
NULL(UNKNOWN) HRGMv2_3869_11 HRGMv2_3869_11_83 109270 110184 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3869_11 HRGMv2_3869_11_84 110181 111440 + GT4
pfam HRGMv2_3869_11 HRGMv2_3869_11_85 111425 112147 + Methyltransf_11 | Methyltransf_23
CAZyme HRGMv2_3869_11 HRGMv2_3869_11_86 112156 112902 + GT2
TC HRGMv2_3869_11 HRGMv2_3869_11_87 112942 115485 + 9.B.144.1.4
pfam HRGMv2_3869_11 HRGMv2_3869_11_88 115438 116217 - Methyltransf_21
CAZyme HRGMv2_3869_11 HRGMv2_3869_11_89 116330 117484 + GT94
Gene ID: HRGMv2_3869_11_82
Type: CAZyme
Location: 107999 - 109237 (+)
Gene ID: HRGMv2_3869_11_83
Type:
Location: 109270 - 110184 (+)
Gene ID: HRGMv2_3869_11_84
Type: CAZyme
Location: 110181 - 111440 (+)
Gene ID: HRGMv2_3869_11_85
Type: pfam
Location: 111425 - 112147 (+)
Gene ID: HRGMv2_3869_11_86
Type: CAZyme
Location: 112156 - 112902 (+)
Gene ID: HRGMv2_3869_11_87
Type: TC
Location: 112942 - 115485 (+)
Gene ID: HRGMv2_3869_11_88
Type: pfam
Location: 115438 - 116217 (-)
Gene ID: HRGMv2_3869_11_89
Type: CAZyme
Location: 116330 - 117484 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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