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Cluster: HRGMv2_3869_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3869_10 HRGMv2_3869_10_73 94788 96674 + 1.B.14.1.19
pfam HRGMv2_3869_10 HRGMv2_3869_10_74 96686 98173 + IU_nuc_hydro | FmdE
TC HRGMv2_3869_10 HRGMv2_3869_10_75 98157 100217 + 1.B.14.1.4
STP HRGMv2_3869_10 HRGMv2_3869_10_76 100434 101522 + Peripla_BP_2
TC HRGMv2_3869_10 HRGMv2_3869_10_77 101527 102588 + 3.A.1.14.18
TC HRGMv2_3869_10 HRGMv2_3869_10_78 102614 103381 + 3.A.1.14.3
pfam HRGMv2_3869_10 HRGMv2_3869_10_79 103431 104291 + TrmO_N | FmdE
CAZyme HRGMv2_3869_10 HRGMv2_3869_10_80 104501 106456 + GH20
TC HRGMv2_3869_10 HRGMv2_3869_10_81 106458 107459 + 8.A.5.1.6
Gene ID: HRGMv2_3869_10_73
Type: TC
Location: 94788 - 96674 (+)
Gene ID: HRGMv2_3869_10_74
Type: pfam
Location: 96686 - 98173 (+)
Gene ID: HRGMv2_3869_10_75
Type: TC
Location: 98157 - 100217 (+)
Gene ID: HRGMv2_3869_10_76
Type: STP
Location: 100434 - 101522 (+)
Gene ID: HRGMv2_3869_10_77
Type: TC
Location: 101527 - 102588 (+)
Gene ID: HRGMv2_3869_10_78
Type: TC
Location: 102614 - 103381 (+)
Gene ID: HRGMv2_3869_10_79
Type: pfam
Location: 103431 - 104291 (+)
Gene ID: HRGMv2_3869_10_80
Type: CAZyme
Location: 104501 - 106456 (+)
Gene ID: HRGMv2_3869_10_81
Type: TC
Location: 106458 - 107459 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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