Cluster: HRGMv2_3869_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: pectin
- Genome ID: HRGMv2_3869
- CGC Family ID: CGCFAM_00079
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3869_10 | HRGMv2_3869_10_11 | 13036 | 15342 | + | 1.B.14.1.4 |
| TC | HRGMv2_3869_10 | HRGMv2_3869_10_12 | 15496 | 18510 | + | 1.B.14.6.1 |
| TC | HRGMv2_3869_10 | HRGMv2_3869_10_13 | 18559 | 20049 | + | 8.A.46.1.5 |
| CAZyme | HRGMv2_3869_10 | HRGMv2_3869_10_14 | 20130 | 21407 | + | GH144 |
| CAZyme | HRGMv2_3869_10 | HRGMv2_3869_10_15 | 21481 | 23742 | + | GH3 |
Gene ID: HRGMv2_3869_10_11
Type: TC
Location: 13036 - 15342 (+)
Type: TC
Location: 13036 - 15342 (+)
Gene ID: HRGMv2_3869_10_12
Type: TC
Location: 15496 - 18510 (+)
Type: TC
Location: 15496 - 18510 (+)
Gene ID: HRGMv2_3869_10_13
Type: TC
Location: 18559 - 20049 (+)
Type: TC
Location: 18559 - 20049 (+)
Gene ID: HRGMv2_3869_10_14
Type: CAZyme
Location: 20130 - 21407 (+)
Type: CAZyme
Location: 20130 - 21407 (+)
Gene ID: HRGMv2_3869_10_15
Type: CAZyme
Location: 21481 - 23742 (+)
Type: CAZyme
Location: 21481 - 23742 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Marinifilaceae
Genus
Odoribacter
Species
Odoribacter sp905204385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.