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Cluster: HRGMv2_3869_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3869_9 HRGMv2_3869_9_89 108680 109741 + GT2
NULL(UNKNOWN) HRGMv2_3869_9 HRGMv2_3869_9_90 109812 110879 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3869_9 HRGMv2_3869_9_91 110876 112315 + 2.A.66.2.23
CAZyme HRGMv2_3869_9 HRGMv2_3869_9_92 112312 113427 + GT4
pfam HRGMv2_3869_9 HRGMv2_3869_9_93 113420 113731 - Polysacc_deac_3
pfam HRGMv2_3869_9 HRGMv2_3869_9_94 114001 114558 - Polysacc_deac_3 | Polysacc_deac_3
CAZyme HRGMv2_3869_9 HRGMv2_3869_9_95 114971 116140 + GT4
CAZyme HRGMv2_3869_9 HRGMv2_3869_9_96 116127 116981 + GT2
Gene ID: HRGMv2_3869_9_89
Type: CAZyme
Location: 108680 - 109741 (+)
Gene ID: HRGMv2_3869_9_90
Type:
Location: 109812 - 110879 (+)
Gene ID: HRGMv2_3869_9_91
Type: TC
Location: 110876 - 112315 (+)
Gene ID: HRGMv2_3869_9_92
Type: CAZyme
Location: 112312 - 113427 (+)
Gene ID: HRGMv2_3869_9_93
Type: pfam
Location: 113420 - 113731 (-)
Gene ID: HRGMv2_3869_9_94
Type: pfam
Location: 114001 - 114558 (-)
Gene ID: HRGMv2_3869_9_95
Type: CAZyme
Location: 114971 - 116140 (+)
Gene ID: HRGMv2_3869_9_96
Type: CAZyme
Location: 116127 - 116981 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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