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Cluster: HRGMv2_3869_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3869_7 HRGMv2_3869_7_94 111281 112144 + 3.A.1.122.2
TC HRGMv2_3869_7 HRGMv2_3869_7_95 112288 113508 + 3.A.1.122.1
TC HRGMv2_3869_7 HRGMv2_3869_7_96 113582 114613 + 8.A.59.2.1
TF HRGMv2_3869_7 HRGMv2_3869_7_97 114652 115374 + LytTR
TC HRGMv2_3869_7 HRGMv2_3869_7_98 115406 117679 + 2.A.37.1.5
TC HRGMv2_3869_7 HRGMv2_3869_7_99 117774 119048 - 2.A.66.1.32
STP HRGMv2_3869_7 HRGMv2_3869_7_100 119333 120130 + Fer4 | Fer4
NULL(UNKNOWN) HRGMv2_3869_7 HRGMv2_3869_7_101 120127 122730 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3869_7 HRGMv2_3869_7_102 122898 123209 - 1.A.3.1.7
pfam HRGMv2_3869_7 HRGMv2_3869_7_103 123206 124867 - RyR | TrkA_N
CAZyme HRGMv2_3869_7 HRGMv2_3869_7_104 125084 126877 + GH15
CAZyme HRGMv2_3869_7 HRGMv2_3869_7_105 126878 129040 - GT20
Gene ID: HRGMv2_3869_7_94
Type: TC
Location: 111281 - 112144 (+)
Gene ID: HRGMv2_3869_7_95
Type: TC
Location: 112288 - 113508 (+)
Gene ID: HRGMv2_3869_7_96
Type: TC
Location: 113582 - 114613 (+)
Gene ID: HRGMv2_3869_7_97
Type: TF
Location: 114652 - 115374 (+)
Gene ID: HRGMv2_3869_7_98
Type: TC
Location: 115406 - 117679 (+)
Gene ID: HRGMv2_3869_7_99
Type: TC
Location: 117774 - 119048 (-)
Gene ID: HRGMv2_3869_7_100
Type: STP
Location: 119333 - 120130 (+)
Gene ID: HRGMv2_3869_7_101
Type:
Location: 120127 - 122730 (+)
Gene ID: HRGMv2_3869_7_102
Type: TC
Location: 122898 - 123209 (-)
Gene ID: HRGMv2_3869_7_103
Type: pfam
Location: 123206 - 124867 (-)
Gene ID: HRGMv2_3869_7_104
Type: CAZyme
Location: 125084 - 126877 (+)
Gene ID: HRGMv2_3869_7_105
Type: CAZyme
Location: 126878 - 129040 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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