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Cluster: HRGMv2_3869_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3869_7 HRGMv2_3869_7_82 92905 94536 + CBM93 | GH33
CAZyme HRGMv2_3869_7 HRGMv2_3869_7_83 94538 96559 + GH20
sulfatase HRGMv2_3869_7 HRGMv2_3869_7_84 96597 97253 + S1_16
CAZyme HRGMv2_3869_7 HRGMv2_3869_7_85 97250 99808 + GH2
CAZyme HRGMv2_3869_7 HRGMv2_3869_7_86 99849 102173 + GH20
TC HRGMv2_3869_7 HRGMv2_3869_7_87 102346 103692 - 2.A.33.1.1
pfam HRGMv2_3869_7 HRGMv2_3869_7_88 103682 104707 - 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
pfam HRGMv2_3869_7 HRGMv2_3869_7_89 104941 106230 - UPF0004 | Radical_SAM
CAZyme HRGMv2_3869_7 HRGMv2_3869_7_90 106370 107497 + GT19
Gene ID: HRGMv2_3869_7_82
Type: CAZyme
Location: 92905 - 94536 (+)
Gene ID: HRGMv2_3869_7_83
Type: CAZyme
Location: 94538 - 96559 (+)
Gene ID: HRGMv2_3869_7_84
Type: sulfatase
Location: 96597 - 97253 (+)
Gene ID: HRGMv2_3869_7_85
Type: CAZyme
Location: 97250 - 99808 (+)
Gene ID: HRGMv2_3869_7_86
Type: CAZyme
Location: 99849 - 102173 (+)
Gene ID: HRGMv2_3869_7_87
Type: TC
Location: 102346 - 103692 (-)
Gene ID: HRGMv2_3869_7_88
Type: pfam
Location: 103682 - 104707 (-)
Gene ID: HRGMv2_3869_7_89
Type: pfam
Location: 104941 - 106230 (-)
Gene ID: HRGMv2_3869_7_90
Type: CAZyme
Location: 106370 - 107497 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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