dbCAN Logo

Cluster: HRGMv2_3869_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3869_5 HRGMv2_3869_5_45 44247 45059 + GT2
CAZyme HRGMv2_3869_5 HRGMv2_3869_5_46 45056 45793 + GT32
CAZyme HRGMv2_3869_5 HRGMv2_3869_5_47 45785 46822 - GT9
pfam HRGMv2_3869_5 HRGMv2_3869_5_48 46826 47431 - DUF4254
pfam HRGMv2_3869_5 HRGMv2_3869_5_49 47523 48278 - Kdo
CAZyme HRGMv2_3869_5 HRGMv2_3869_5_50 48275 49453 - GT4
pfam HRGMv2_3869_5 HRGMv2_3869_5_51 49496 50800 + Wzy_C
CAZyme HRGMv2_3869_5 HRGMv2_3869_5_52 50797 51795 - GT9
TC HRGMv2_3869_5 HRGMv2_3869_5_53 51782 53218 - 1.B.73.2.2
pfam HRGMv2_3869_5 HRGMv2_3869_5_54 53215 53922 - NTP_transferase | IspD | NTP_transf_3
CAZyme HRGMv2_3869_5 HRGMv2_3869_5_55 54002 56197 - GH92
Gene ID: HRGMv2_3869_5_45
Type: CAZyme
Location: 44247 - 45059 (+)
Gene ID: HRGMv2_3869_5_46
Type: CAZyme
Location: 45056 - 45793 (+)
Gene ID: HRGMv2_3869_5_47
Type: CAZyme
Location: 45785 - 46822 (-)
Gene ID: HRGMv2_3869_5_48
Type: pfam
Location: 46826 - 47431 (-)
Gene ID: HRGMv2_3869_5_49
Type: pfam
Location: 47523 - 48278 (-)
Gene ID: HRGMv2_3869_5_50
Type: CAZyme
Location: 48275 - 49453 (-)
Gene ID: HRGMv2_3869_5_51
Type: pfam
Location: 49496 - 50800 (+)
Gene ID: HRGMv2_3869_5_52
Type: CAZyme
Location: 50797 - 51795 (-)
Gene ID: HRGMv2_3869_5_53
Type: TC
Location: 51782 - 53218 (-)
Gene ID: HRGMv2_3869_5_54
Type: pfam
Location: 53215 - 53922 (-)
Gene ID: HRGMv2_3869_5_55
Type: CAZyme
Location: 54002 - 56197 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_3869_5_48 vegetarian > vegan 1.31179 0.04743

🧭 Explore Read Mapping of CGC

← Back to Cluster List