Cluster: HRGMv2_3867_CGC4
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_3867
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3867_1 | HRGMv2_3867_1_375 | 366529 | 368505 | - | CBM9 | GH93 |
| NULL(UNKNOWN) | HRGMv2_3867_1 | HRGMv2_3867_1_376 | 368606 | 369574 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3867_1 | HRGMv2_3867_1_377 | 369654 | 371363 | - | 8.A.46.1.3 |
| TC | HRGMv2_3867_1 | HRGMv2_3867_1_378 | 371376 | 374516 | - | 1.B.14.6.1 |
| pfam | HRGMv2_3867_1 | HRGMv2_3867_1_379 | 374789 | 376639 | - | Por_Secre_tail |
| NULL(UNKNOWN) | HRGMv2_3867_1 | HRGMv2_3867_1_380 | 376719 | 376886 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3867_1 | HRGMv2_3867_1_381 | 377136 | 378059 | + | GH43_31 |
| CAZyme | HRGMv2_3867_1 | HRGMv2_3867_1_382 | 378097 | 380007 | + | GH2 |
| CAZyme | HRGMv2_3867_1 | HRGMv2_3867_1_383 | 380082 | 382634 | + | GH78 |
| pfam | HRGMv2_3867_1 | HRGMv2_3867_1_384 | 382640 | 384208 | + | Laminin_G_3 | Lipase_GDSL_2 |
| pfam | HRGMv2_3867_1 | HRGMv2_3867_1_385 | 384189 | 385154 | - | Radical_SAM | BATS |
| CAZyme | HRGMv2_3867_1 | HRGMv2_3867_1_386 | 385294 | 388230 | - | GH2 |
| TC | HRGMv2_3867_1 | HRGMv2_3867_1_387 | 388673 | 390502 | - | 2.A.2.6.3 |
Gene ID: HRGMv2_3867_1_375
Type: CAZyme
Location: 366529 - 368505 (-)
Type: CAZyme
Location: 366529 - 368505 (-)
Gene ID: HRGMv2_3867_1_376
Type:
Location: 368606 - 369574 (-)
Type:
Location: 368606 - 369574 (-)
Gene ID: HRGMv2_3867_1_377
Type: TC
Location: 369654 - 371363 (-)
Type: TC
Location: 369654 - 371363 (-)
Gene ID: HRGMv2_3867_1_378
Type: TC
Location: 371376 - 374516 (-)
Type: TC
Location: 371376 - 374516 (-)
Gene ID: HRGMv2_3867_1_379
Type: pfam
Location: 374789 - 376639 (-)
Type: pfam
Location: 374789 - 376639 (-)
Gene ID: HRGMv2_3867_1_380
Type:
Location: 376719 - 376886 (+)
Type:
Location: 376719 - 376886 (+)
Gene ID: HRGMv2_3867_1_381
Type: CAZyme
Location: 377136 - 378059 (+)
Type: CAZyme
Location: 377136 - 378059 (+)
Gene ID: HRGMv2_3867_1_382
Type: CAZyme
Location: 378097 - 380007 (+)
Type: CAZyme
Location: 378097 - 380007 (+)
Gene ID: HRGMv2_3867_1_383
Type: CAZyme
Location: 380082 - 382634 (+)
Type: CAZyme
Location: 380082 - 382634 (+)
Gene ID: HRGMv2_3867_1_384
Type: pfam
Location: 382640 - 384208 (+)
Type: pfam
Location: 382640 - 384208 (+)
Gene ID: HRGMv2_3867_1_385
Type: pfam
Location: 384189 - 385154 (-)
Type: pfam
Location: 384189 - 385154 (-)
Gene ID: HRGMv2_3867_1_386
Type: CAZyme
Location: 385294 - 388230 (-)
Type: CAZyme
Location: 385294 - 388230 (-)
Gene ID: HRGMv2_3867_1_387
Type: TC
Location: 388673 - 390502 (-)
Type: TC
Location: 388673 - 390502 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
JAGBWK01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.