Cluster: HRGMv2_3867_CGC34
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate: pectin/galactan
- Genome ID: HRGMv2_3867
- CGC Family ID: CGCFAM_00031
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3867_26 | HRGMv2_3867_26_20 | 18874 | 20847 | + | 2.A.72.1.3 |
| TF | HRGMv2_3867_26 | HRGMv2_3867_26_21 | 21038 | 24979 | + | HTH_AraC |
| TC | HRGMv2_3867_26 | HRGMv2_3867_26_22 | 25245 | 28211 | + | 1.B.14.6.1 |
| TC | HRGMv2_3867_26 | HRGMv2_3867_26_23 | 28224 | 29795 | + | 8.A.46.1.1 |
| pfam | HRGMv2_3867_26 | HRGMv2_3867_26_24 | 29806 | 31518 | + | SusE | DUF5111 | DUF5114 |
| CAZyme | HRGMv2_3867_26 | HRGMv2_3867_26_25 | 31568 | 32614 | + | GH53 |
| CAZyme | HRGMv2_3867_26 | HRGMv2_3867_26_26 | 32615 | 33670 | + | GH53 |
Gene ID: HRGMv2_3867_26_20
Type: TC
Location: 18874 - 20847 (+)
Type: TC
Location: 18874 - 20847 (+)
Gene ID: HRGMv2_3867_26_21
Type: TF
Location: 21038 - 24979 (+)
Type: TF
Location: 21038 - 24979 (+)
Gene ID: HRGMv2_3867_26_22
Type: TC
Location: 25245 - 28211 (+)
Type: TC
Location: 25245 - 28211 (+)
Gene ID: HRGMv2_3867_26_23
Type: TC
Location: 28224 - 29795 (+)
Type: TC
Location: 28224 - 29795 (+)
Gene ID: HRGMv2_3867_26_24
Type: pfam
Location: 29806 - 31518 (+)
Type: pfam
Location: 29806 - 31518 (+)
Gene ID: HRGMv2_3867_26_25
Type: CAZyme
Location: 31568 - 32614 (+)
Type: CAZyme
Location: 31568 - 32614 (+)
Gene ID: HRGMv2_3867_26_26
Type: CAZyme
Location: 32615 - 33670 (+)
Type: CAZyme
Location: 32615 - 33670 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
JAGBWK01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.