Cluster: HRGMv2_3867_CGC2
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3867
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3867_1 | HRGMv2_3867_1_306 | 275212 | 278580 | + | 3.A.5.1.1 |
| NULL(UNKNOWN) | HRGMv2_3867_1 | HRGMv2_3867_1_307 | 278680 | 279666 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3867_1 | HRGMv2_3867_1_308 | 279846 | 280562 | + | 9.B.20.1.4 |
| TC | HRGMv2_3867_1 | HRGMv2_3867_1_309 | 280577 | 282781 | + | 2.A.37.5.2 |
| pfam | HRGMv2_3867_1 | HRGMv2_3867_1_310 | 282840 | 283304 | + | AhpC-TSA | Redoxin | AhpC-TSA_2 |
| pfam | HRGMv2_3867_1 | HRGMv2_3867_1_311 | 283301 | 283885 | + | RuvA_N | RuvA_C | HHH_5 |
| TC | HRGMv2_3867_1 | HRGMv2_3867_1_312 | 283921 | 291369 | + | 9.A.25.1.1 |
| pfam | HRGMv2_3867_1 | HRGMv2_3867_1_313 | 291489 | 292349 | - | META | META |
| TC | HRGMv2_3867_1 | HRGMv2_3867_1_314 | 292456 | 293046 | + | 2.A.51.1.5 |
| TC | HRGMv2_3867_1 | HRGMv2_3867_1_315 | 293043 | 293618 | + | 2.A.51.1.6 |
| pfam | HRGMv2_3867_1 | HRGMv2_3867_1_316 | 293615 | 294901 | + | Mur_ligase_C | Mur_ligase_M |
| CAZyme | HRGMv2_3867_1 | HRGMv2_3867_1_317 | 295014 | 296009 | - | CBM50 |
Gene ID: HRGMv2_3867_1_306
Type: TC
Location: 275212 - 278580 (+)
Type: TC
Location: 275212 - 278580 (+)
Gene ID: HRGMv2_3867_1_307
Type:
Location: 278680 - 279666 (+)
Type:
Location: 278680 - 279666 (+)
Gene ID: HRGMv2_3867_1_308
Type: TC
Location: 279846 - 280562 (+)
Type: TC
Location: 279846 - 280562 (+)
Gene ID: HRGMv2_3867_1_309
Type: TC
Location: 280577 - 282781 (+)
Type: TC
Location: 280577 - 282781 (+)
Gene ID: HRGMv2_3867_1_310
Type: pfam
Location: 282840 - 283304 (+)
Type: pfam
Location: 282840 - 283304 (+)
Gene ID: HRGMv2_3867_1_311
Type: pfam
Location: 283301 - 283885 (+)
Type: pfam
Location: 283301 - 283885 (+)
Gene ID: HRGMv2_3867_1_312
Type: TC
Location: 283921 - 291369 (+)
Type: TC
Location: 283921 - 291369 (+)
Gene ID: HRGMv2_3867_1_313
Type: pfam
Location: 291489 - 292349 (-)
Type: pfam
Location: 291489 - 292349 (-)
Gene ID: HRGMv2_3867_1_314
Type: TC
Location: 292456 - 293046 (+)
Type: TC
Location: 292456 - 293046 (+)
Gene ID: HRGMv2_3867_1_315
Type: TC
Location: 293043 - 293618 (+)
Type: TC
Location: 293043 - 293618 (+)
Gene ID: HRGMv2_3867_1_316
Type: pfam
Location: 293615 - 294901 (+)
Type: pfam
Location: 293615 - 294901 (+)
Gene ID: HRGMv2_3867_1_317
Type: CAZyme
Location: 295014 - 296009 (-)
Type: CAZyme
Location: 295014 - 296009 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
JAGBWK01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.