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Cluster: HRGMv2_3867_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3867_7 HRGMv2_3867_7_41 43901 44605 - 9.B.186.1.3
TC HRGMv2_3867_7 HRGMv2_3867_7_42 44817 45734 + 2.A.7.3.40
pfam HRGMv2_3867_7 HRGMv2_3867_7_43 45749 46345 - DNA_alkylation
CAZyme HRGMv2_3867_7 HRGMv2_3867_7_44 46534 49014 + GT51
NULL(UNKNOWN) HRGMv2_3867_7 HRGMv2_3867_7_45 49064 49834 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3867_7 HRGMv2_3867_7_46 49942 52122 - 2.A.37.2.5
Gene ID: HRGMv2_3867_7_41
Type: TC
Location: 43901 - 44605 (-)
Gene ID: HRGMv2_3867_7_42
Type: TC
Location: 44817 - 45734 (+)
Gene ID: HRGMv2_3867_7_43
Type: pfam
Location: 45749 - 46345 (-)
Gene ID: HRGMv2_3867_7_44
Type: CAZyme
Location: 46534 - 49014 (+)
Gene ID: HRGMv2_3867_7_45
Type:
Location: 49064 - 49834 (+)
Gene ID: HRGMv2_3867_7_46
Type: TC
Location: 49942 - 52122 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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