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Cluster: HRGMv2_3867_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3867_6 HRGMv2_3867_6_21 33578 34648 - GH5_13
CAZyme HRGMv2_3867_6 HRGMv2_3867_6_22 34709 36502 - GH2
pfam HRGMv2_3867_6 HRGMv2_3867_6_23 36925 38760 + Por_Secre_tail
TC HRGMv2_3867_6 HRGMv2_3867_6_24 38972 42073 + 1.B.14.6.1
pfam HRGMv2_3867_6 HRGMv2_3867_6_25 42085 43785 + SusD_RagB | SusD-like_3
NULL(UNKNOWN) HRGMv2_3867_6 HRGMv2_3867_6_26 43834 44853 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3867_6 HRGMv2_3867_6_27 44850 46790 + GH93
TF HRGMv2_3867_6 HRGMv2_3867_6_28 46846 50895 + HTH_AraC
CAZyme HRGMv2_3867_6 HRGMv2_3867_6_29 51114 52220 + GH5_13
Gene ID: HRGMv2_3867_6_21
Type: CAZyme
Location: 33578 - 34648 (-)
Gene ID: HRGMv2_3867_6_22
Type: CAZyme
Location: 34709 - 36502 (-)
Gene ID: HRGMv2_3867_6_23
Type: pfam
Location: 36925 - 38760 (+)
Gene ID: HRGMv2_3867_6_24
Type: TC
Location: 38972 - 42073 (+)
Gene ID: HRGMv2_3867_6_25
Type: pfam
Location: 42085 - 43785 (+)
Gene ID: HRGMv2_3867_6_26
Type:
Location: 43834 - 44853 (+)
Gene ID: HRGMv2_3867_6_27
Type: CAZyme
Location: 44850 - 46790 (+)
Gene ID: HRGMv2_3867_6_28
Type: TF
Location: 46846 - 50895 (+)
Gene ID: HRGMv2_3867_6_29
Type: CAZyme
Location: 51114 - 52220 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
JAGBWK01
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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