Cluster: HRGMv2_3867_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: HRGMv2_3867
- CGC Family ID: CGCFAM_00001
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3867_4 | HRGMv2_3867_4_130 | 158153 | 160627 | - | GH2 |
| CAZyme | HRGMv2_3867_4 | HRGMv2_3867_4_131 | 160816 | 163071 | + | GH147 |
| pfam | HRGMv2_3867_4 | HRGMv2_3867_4_132 | 163333 | 164490 | + | PS_Dcarbxylase |
| TC | HRGMv2_3867_4 | HRGMv2_3867_4_133 | 164604 | 166226 | + | 2.A.3.7.1 |
| pfam | HRGMv2_3867_4 | HRGMv2_3867_4_134 | 166414 | 168003 | - | SusD_RagB | SusD-like_3 |
| TC | HRGMv2_3867_4 | HRGMv2_3867_4_135 | 168012 | 171092 | - | 1.B.14.6.1 |
Gene ID: HRGMv2_3867_4_130
Type: CAZyme
Location: 158153 - 160627 (-)
Type: CAZyme
Location: 158153 - 160627 (-)
Gene ID: HRGMv2_3867_4_131
Type: CAZyme
Location: 160816 - 163071 (+)
Type: CAZyme
Location: 160816 - 163071 (+)
Gene ID: HRGMv2_3867_4_132
Type: pfam
Location: 163333 - 164490 (+)
Type: pfam
Location: 163333 - 164490 (+)
Gene ID: HRGMv2_3867_4_133
Type: TC
Location: 164604 - 166226 (+)
Type: TC
Location: 164604 - 166226 (+)
Gene ID: HRGMv2_3867_4_134
Type: pfam
Location: 166414 - 168003 (-)
Type: pfam
Location: 166414 - 168003 (-)
Gene ID: HRGMv2_3867_4_135
Type: TC
Location: 168012 - 171092 (-)
Type: TC
Location: 168012 - 171092 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
JAGBWK01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.