Cluster: HRGMv2_3867_CGC14
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 7
- Substrate: galactan
- Genome ID: HRGMv2_3867
- CGC Family ID: CGCFAM_01487
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3867_4 | HRGMv2_3867_4_108 | 120142 | 121374 | + | 9.B.156.3.1 |
| NULL(UNKNOWN) | HRGMv2_3867_4 | HRGMv2_3867_4_109 | 121638 | 123374 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3867_4 | HRGMv2_3867_4_110 | 123652 | 125649 | + | GH36 |
| CAZyme | HRGMv2_3867_4 | HRGMv2_3867_4_111 | 125743 | 128214 | + | GH36 |
| TF | HRGMv2_3867_4 | HRGMv2_3867_4_112 | 128309 | 132370 | + | HTH_AraC |
| CAZyme | HRGMv2_3867_4 | HRGMv2_3867_4_113 | 132415 | 134673 | + | GH3 |
| CAZyme | HRGMv2_3867_4 | HRGMv2_3867_4_114 | 134716 | 136650 | + | CE20 | CE20 |
| CAZyme | HRGMv2_3867_4 | HRGMv2_3867_4_115 | 136667 | 138802 | + | GH36 |
| CAZyme | HRGMv2_3867_4 | HRGMv2_3867_4_116 | 138845 | 140965 | + | GH36 |
| CAZyme | HRGMv2_3867_4 | HRGMv2_3867_4_117 | 140962 | 143139 | + | GH92 |
Gene ID: HRGMv2_3867_4_108
Type: TC
Location: 120142 - 121374 (+)
Type: TC
Location: 120142 - 121374 (+)
Gene ID: HRGMv2_3867_4_109
Type:
Location: 121638 - 123374 (+)
Type:
Location: 121638 - 123374 (+)
Gene ID: HRGMv2_3867_4_110
Type: CAZyme
Location: 123652 - 125649 (+)
Type: CAZyme
Location: 123652 - 125649 (+)
Gene ID: HRGMv2_3867_4_111
Type: CAZyme
Location: 125743 - 128214 (+)
Type: CAZyme
Location: 125743 - 128214 (+)
Gene ID: HRGMv2_3867_4_112
Type: TF
Location: 128309 - 132370 (+)
Type: TF
Location: 128309 - 132370 (+)
Gene ID: HRGMv2_3867_4_113
Type: CAZyme
Location: 132415 - 134673 (+)
Type: CAZyme
Location: 132415 - 134673 (+)
Gene ID: HRGMv2_3867_4_114
Type: CAZyme
Location: 134716 - 136650 (+)
Type: CAZyme
Location: 134716 - 136650 (+)
Gene ID: HRGMv2_3867_4_115
Type: CAZyme
Location: 136667 - 138802 (+)
Type: CAZyme
Location: 136667 - 138802 (+)
Gene ID: HRGMv2_3867_4_116
Type: CAZyme
Location: 138845 - 140965 (+)
Type: CAZyme
Location: 138845 - 140965 (+)
Gene ID: HRGMv2_3867_4_117
Type: CAZyme
Location: 140962 - 143139 (+)
Type: CAZyme
Location: 140962 - 143139 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
JAGBWK01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.