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Cluster: HRGMv2_3867_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3867_1 HRGMv2_3867_1_83 95414 98194 - GH13
pfam HRGMv2_3867_1 HRGMv2_3867_1_84 98304 98783 + Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10
NULL(UNKNOWN) HRGMv2_3867_1 HRGMv2_3867_1_85 98907 99656 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3867_1 HRGMv2_3867_1_86 99745 100968 + 2.A.23.1.5
Gene ID: HRGMv2_3867_1_83
Type: CAZyme
Location: 95414 - 98194 (-)
Gene ID: HRGMv2_3867_1_84
Type: pfam
Location: 98304 - 98783 (+)
Gene ID: HRGMv2_3867_1_85
Type:
Location: 98907 - 99656 (-)
Gene ID: HRGMv2_3867_1_86
Type: TC
Location: 99745 - 100968 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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