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Cluster: HRGMv2_3866_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3866_15 HRGMv2_3866_15_10 7965 8774 + GT5
pfam HRGMv2_3866_15 HRGMv2_3866_15_11 8796 10244 + DUF4270
pfam HRGMv2_3866_15 HRGMv2_3866_15_12 10577 13132 + Ribonuc_red_lgN | Ribonuc_red_lgC
TC HRGMv2_3866_15 HRGMv2_3866_15_13 13273 14661 - 3.D.9.1.1
TC HRGMv2_3866_15 HRGMv2_3866_15_14 14768 16204 - 3.D.1.5.1
TC HRGMv2_3866_15 HRGMv2_3866_15_15 16269 18155 - 3.D.1.3.1
TC HRGMv2_3866_15 HRGMv2_3866_15_16 18247 18567 - 3.D.1.2.1
TC HRGMv2_3866_15 HRGMv2_3866_15_17 18581 19084 - 3.D.9.1.1
TC HRGMv2_3866_15 HRGMv2_3866_15_18 19098 19631 - 3.D.1.5.1
TC HRGMv2_3866_15 HRGMv2_3866_15_19 19724 20755 - 3.D.1.5.1
TC HRGMv2_3866_15 HRGMv2_3866_15_20 20770 21816 - 3.D.1.6.3
TC HRGMv2_3866_15 HRGMv2_3866_15_21 21835 23193 - 3.D.1.3.1
TC HRGMv2_3866_15 HRGMv2_3866_15_22 23251 23775 - 3.D.1.6.1
TC HRGMv2_3866_15 HRGMv2_3866_15_23 23788 25023 - 3.D.1.5.1
TC HRGMv2_3866_15 HRGMv2_3866_15_24 25041 25577 - 3.D.1.5.1
TC HRGMv2_3866_15 HRGMv2_3866_15_25 25577 26131 - 3.D.1.3.1
TC HRGMv2_3866_15 HRGMv2_3866_15_26 26192 26560 - 3.D.9.1.1
pfam HRGMv2_3866_15 HRGMv2_3866_15_27 26836 28044 - SDH_alpha | SDH_beta | SDH_beta
NULL(UNKNOWN) HRGMv2_3866_15 HRGMv2_3866_15_28 28096 29598 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3866_15 HRGMv2_3866_15_29 29615 30805 - 3.A.1.132.1
TC HRGMv2_3866_15 HRGMv2_3866_15_30 30928 32235 - 2.A.49.9.2
Gene ID: HRGMv2_3866_15_10
Type: CAZyme
Location: 7965 - 8774 (+)
Gene ID: HRGMv2_3866_15_11
Type: pfam
Location: 8796 - 10244 (+)
Gene ID: HRGMv2_3866_15_12
Type: pfam
Location: 10577 - 13132 (+)
Gene ID: HRGMv2_3866_15_13
Type: TC
Location: 13273 - 14661 (-)
Gene ID: HRGMv2_3866_15_14
Type: TC
Location: 14768 - 16204 (-)
Gene ID: HRGMv2_3866_15_15
Type: TC
Location: 16269 - 18155 (-)
Gene ID: HRGMv2_3866_15_16
Type: TC
Location: 18247 - 18567 (-)
Gene ID: HRGMv2_3866_15_17
Type: TC
Location: 18581 - 19084 (-)
Gene ID: HRGMv2_3866_15_18
Type: TC
Location: 19098 - 19631 (-)
Gene ID: HRGMv2_3866_15_19
Type: TC
Location: 19724 - 20755 (-)
Gene ID: HRGMv2_3866_15_20
Type: TC
Location: 20770 - 21816 (-)
Gene ID: HRGMv2_3866_15_21
Type: TC
Location: 21835 - 23193 (-)
Gene ID: HRGMv2_3866_15_22
Type: TC
Location: 23251 - 23775 (-)
Gene ID: HRGMv2_3866_15_23
Type: TC
Location: 23788 - 25023 (-)
Gene ID: HRGMv2_3866_15_24
Type: TC
Location: 25041 - 25577 (-)
Gene ID: HRGMv2_3866_15_25
Type: TC
Location: 25577 - 26131 (-)
Gene ID: HRGMv2_3866_15_26
Type: TC
Location: 26192 - 26560 (-)
Gene ID: HRGMv2_3866_15_27
Type: pfam
Location: 26836 - 28044 (-)
Gene ID: HRGMv2_3866_15_28
Type:
Location: 28096 - 29598 (-)
Gene ID: HRGMv2_3866_15_29
Type: TC
Location: 29615 - 30805 (-)
Gene ID: HRGMv2_3866_15_30
Type: TC
Location: 30928 - 32235 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Dysgonomonadaceae
→
Genus
Dysgonomonas
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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