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Cluster: HRGMv2_3866_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3866_12 HRGMv2_3866_12_26 28608 31244 - GH2
CAZyme HRGMv2_3866_12 HRGMv2_3866_12_27 31252 33525 - GH92
CAZyme HRGMv2_3866_12 HRGMv2_3866_12_28 33541 35031 - GH125
CAZyme HRGMv2_3866_12 HRGMv2_3866_12_29 35037 37331 - GH92
CAZyme HRGMv2_3866_12 HRGMv2_3866_12_30 37486 39480 - GH18
pfam HRGMv2_3866_12 HRGMv2_3866_12_31 39514 40677 - BT_3987-like_N | Laminin_G_3
pfam HRGMv2_3866_12 HRGMv2_3866_12_32 40685 41707 - GH18_BT1044-like
TC HRGMv2_3866_12 HRGMv2_3866_12_33 41737 43296 - 8.A.46.2.2
TC HRGMv2_3866_12 HRGMv2_3866_12_34 43321 46725 - 1.B.14.6.13
STP HRGMv2_3866_12 HRGMv2_3866_12_35 47117 48094 - FecR
STP HRGMv2_3866_12 HRGMv2_3866_12_36 48160 48723 - Sigma70_r2 | Sigma70_r4_2
CAZyme HRGMv2_3866_12 HRGMv2_3866_12_37 49027 51153 + GH97
TF HRGMv2_3866_12 HRGMv2_3866_12_38 51310 51903 + GerE
STP HRGMv2_3866_12 HRGMv2_3866_12_39 51934 52920 + FecR
TC HRGMv2_3866_12 HRGMv2_3866_12_40 53027 56533 + 1.B.14.6.1
TC HRGMv2_3866_12 HRGMv2_3866_12_41 56639 58003 + 8.A.46.1.5
sulfatase HRGMv2_3866_12 HRGMv2_3866_12_42 58219 59115 + S1_19
pfam HRGMv2_3866_12 HRGMv2_3866_12_43 59188 60117 + NAGPA
TC HRGMv2_3866_12 HRGMv2_3866_12_44 60408 61799 + 2.A.1.4.2
pfam HRGMv2_3866_12 HRGMv2_3866_12_45 61937 62803 + PNP_UDP_1
TC HRGMv2_3866_12 HRGMv2_3866_12_46 62870 67495 - 1.B.14.6.1
Gene ID: HRGMv2_3866_12_26
Type: CAZyme
Location: 28608 - 31244 (-)
Gene ID: HRGMv2_3866_12_27
Type: CAZyme
Location: 31252 - 33525 (-)
Gene ID: HRGMv2_3866_12_28
Type: CAZyme
Location: 33541 - 35031 (-)
Gene ID: HRGMv2_3866_12_29
Type: CAZyme
Location: 35037 - 37331 (-)
Gene ID: HRGMv2_3866_12_30
Type: CAZyme
Location: 37486 - 39480 (-)
Gene ID: HRGMv2_3866_12_31
Type: pfam
Location: 39514 - 40677 (-)
Gene ID: HRGMv2_3866_12_32
Type: pfam
Location: 40685 - 41707 (-)
Gene ID: HRGMv2_3866_12_33
Type: TC
Location: 41737 - 43296 (-)
Gene ID: HRGMv2_3866_12_34
Type: TC
Location: 43321 - 46725 (-)
Gene ID: HRGMv2_3866_12_35
Type: STP
Location: 47117 - 48094 (-)
Gene ID: HRGMv2_3866_12_36
Type: STP
Location: 48160 - 48723 (-)
Gene ID: HRGMv2_3866_12_37
Type: CAZyme
Location: 49027 - 51153 (+)
Gene ID: HRGMv2_3866_12_38
Type: TF
Location: 51310 - 51903 (+)
Gene ID: HRGMv2_3866_12_39
Type: STP
Location: 51934 - 52920 (+)
Gene ID: HRGMv2_3866_12_40
Type: TC
Location: 53027 - 56533 (+)
Gene ID: HRGMv2_3866_12_41
Type: TC
Location: 56639 - 58003 (+)
Gene ID: HRGMv2_3866_12_42
Type: sulfatase
Location: 58219 - 59115 (+)
Gene ID: HRGMv2_3866_12_43
Type: pfam
Location: 59188 - 60117 (+)
Gene ID: HRGMv2_3866_12_44
Type: TC
Location: 60408 - 61799 (+)
Gene ID: HRGMv2_3866_12_45
Type: pfam
Location: 61937 - 62803 (+)
Gene ID: HRGMv2_3866_12_46
Type: TC
Location: 62870 - 67495 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Dysgonomonadaceae
→
Genus
Dysgonomonas
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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