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Cluster: HRGMv2_3866_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3866_10 HRGMv2_3866_10_111 139803 141647 + 3.A.6.1.1
TC HRGMv2_3866_10 HRGMv2_3866_10_112 141773 142714 + 2.A.4.1.3
pfam HRGMv2_3866_10 HRGMv2_3866_10_113 142779 143207 - Glyoxalase | 3-dmu-9_3-mt
CAZyme HRGMv2_3866_10 HRGMv2_3866_10_114 143497 144810 - GH28
NULL(UNKNOWN) HRGMv2_3866_10 HRGMv2_3866_10_115 145014 145196 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_3866_10 HRGMv2_3866_10_116 145342 146661 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3866_10 HRGMv2_3866_10_117 146788 147210 + 1.A.22.1.1
Gene ID: HRGMv2_3866_10_111
Type: TC
Location: 139803 - 141647 (+)
Gene ID: HRGMv2_3866_10_112
Type: TC
Location: 141773 - 142714 (+)
Gene ID: HRGMv2_3866_10_113
Type: pfam
Location: 142779 - 143207 (-)
Gene ID: HRGMv2_3866_10_114
Type: CAZyme
Location: 143497 - 144810 (-)
Gene ID: HRGMv2_3866_10_115
Type:
Location: 145014 - 145196 (+)
Gene ID: HRGMv2_3866_10_116
Type:
Location: 145342 - 146661 (+)
Gene ID: HRGMv2_3866_10_117
Type: TC
Location: 146788 - 147210 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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