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Cluster: HRGMv2_3866_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3866_10 HRGMv2_3866_10_60 66090 67718 - GT83
CAZyme HRGMv2_3866_10 HRGMv2_3866_10_61 67884 68624 + GT2
TC HRGMv2_3866_10 HRGMv2_3866_10_62 68630 69244 + 2.A.123.4.1
CAZyme HRGMv2_3866_10 HRGMv2_3866_10_63 69261 71252 - GH13_8
CAZyme HRGMv2_3866_10 HRGMv2_3866_10_64 71578 75822 - GT3 | GT35
CAZyme HRGMv2_3866_10 HRGMv2_3866_10_65 75880 77298 - GH57
CAZyme HRGMv2_3866_10 HRGMv2_3866_10_66 77423 78700 - GT4
CAZyme HRGMv2_3866_10 HRGMv2_3866_10_67 78733 80685 - GH133
Gene ID: HRGMv2_3866_10_60
Type: CAZyme
Location: 66090 - 67718 (-)
Gene ID: HRGMv2_3866_10_61
Type: CAZyme
Location: 67884 - 68624 (+)
Gene ID: HRGMv2_3866_10_62
Type: TC
Location: 68630 - 69244 (+)
Gene ID: HRGMv2_3866_10_63
Type: CAZyme
Location: 69261 - 71252 (-)
Gene ID: HRGMv2_3866_10_64
Type: CAZyme
Location: 71578 - 75822 (-)
Gene ID: HRGMv2_3866_10_65
Type: CAZyme
Location: 75880 - 77298 (-)
Gene ID: HRGMv2_3866_10_66
Type: CAZyme
Location: 77423 - 78700 (-)
Gene ID: HRGMv2_3866_10_67
Type: CAZyme
Location: 78733 - 80685 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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