Cluster: HRGMv2_3866_CGC26
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 6
- Substrate:
- Genome ID: HRGMv2_3866
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3866_9 | HRGMv2_3866_9_51 | 71129 | 74272 | - | 1.B.14.6.1 |
| pfam | HRGMv2_3866_9 | HRGMv2_3866_9_52 | 75055 | 76878 | - | SusD_RagB | SusD-like_3 |
| TC | HRGMv2_3866_9 | HRGMv2_3866_9_53 | 76995 | 80105 | - | 1.B.14.6.1 |
| TF | HRGMv2_3866_9 | HRGMv2_3866_9_54 | 80815 | 84681 | - | HTH_AraC |
| CAZyme | HRGMv2_3866_9 | HRGMv2_3866_9_55 | 85016 | 87616 | + | GH3 |
| CAZyme | HRGMv2_3866_9 | HRGMv2_3866_9_56 | 87620 | 89539 | + | GH97 |
| TF | HRGMv2_3866_9 | HRGMv2_3866_9_57 | 89919 | 93797 | + | HTH_AraC |
| CAZyme | HRGMv2_3866_9 | HRGMv2_3866_9_58 | 93873 | 94889 | - | GH43_29 |
| CAZyme | HRGMv2_3866_9 | HRGMv2_3866_9_59 | 94903 | 97488 | - | GH31_4 |
| TC | HRGMv2_3866_9 | HRGMv2_3866_9_60 | 97548 | 99245 | - | 8.A.46.1.5 |
| TC | HRGMv2_3866_9 | HRGMv2_3866_9_61 | 99258 | 102284 | - | 1.B.14.6.1 |
| TF | HRGMv2_3866_9 | HRGMv2_3866_9_62 | 102777 | 106865 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_3866_9 | HRGMv2_3866_9_63 | 106956 | 109889 | - | GH28 |
| CAZyme | HRGMv2_3866_9 | HRGMv2_3866_9_64 | 110012 | 112822 | - | GH28 |
| TC | HRGMv2_3866_9 | HRGMv2_3866_9_65 | 112968 | 114191 | - | 2.A.1.7.1 |
Gene ID: HRGMv2_3866_9_51
Type: TC
Location: 71129 - 74272 (-)
Type: TC
Location: 71129 - 74272 (-)
Gene ID: HRGMv2_3866_9_52
Type: pfam
Location: 75055 - 76878 (-)
Type: pfam
Location: 75055 - 76878 (-)
Gene ID: HRGMv2_3866_9_53
Type: TC
Location: 76995 - 80105 (-)
Type: TC
Location: 76995 - 80105 (-)
Gene ID: HRGMv2_3866_9_54
Type: TF
Location: 80815 - 84681 (-)
Type: TF
Location: 80815 - 84681 (-)
Gene ID: HRGMv2_3866_9_55
Type: CAZyme
Location: 85016 - 87616 (+)
Type: CAZyme
Location: 85016 - 87616 (+)
Gene ID: HRGMv2_3866_9_56
Type: CAZyme
Location: 87620 - 89539 (+)
Type: CAZyme
Location: 87620 - 89539 (+)
Gene ID: HRGMv2_3866_9_57
Type: TF
Location: 89919 - 93797 (+)
Type: TF
Location: 89919 - 93797 (+)
Gene ID: HRGMv2_3866_9_58
Type: CAZyme
Location: 93873 - 94889 (-)
Type: CAZyme
Location: 93873 - 94889 (-)
Gene ID: HRGMv2_3866_9_59
Type: CAZyme
Location: 94903 - 97488 (-)
Type: CAZyme
Location: 94903 - 97488 (-)
Gene ID: HRGMv2_3866_9_60
Type: TC
Location: 97548 - 99245 (-)
Type: TC
Location: 97548 - 99245 (-)
Gene ID: HRGMv2_3866_9_61
Type: TC
Location: 99258 - 102284 (-)
Type: TC
Location: 99258 - 102284 (-)
Gene ID: HRGMv2_3866_9_62
Type: TF
Location: 102777 - 106865 (-)
Type: TF
Location: 102777 - 106865 (-)
Gene ID: HRGMv2_3866_9_63
Type: CAZyme
Location: 106956 - 109889 (-)
Type: CAZyme
Location: 106956 - 109889 (-)
Gene ID: HRGMv2_3866_9_64
Type: CAZyme
Location: 110012 - 112822 (-)
Type: CAZyme
Location: 110012 - 112822 (-)
Gene ID: HRGMv2_3866_9_65
Type: TC
Location: 112968 - 114191 (-)
Type: TC
Location: 112968 - 114191 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Dysgonomonadaceae
Genus
Dysgonomonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.