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Cluster: HRGMv2_3866_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3866_5 HRGMv2_3866_5_72 81036 83762 + GH2
pfam HRGMv2_3866_5 HRGMv2_3866_5_73 83806 84573 + BetaGal_ABD_1 | BetaGal_gal-bd
TC HRGMv2_3866_5 HRGMv2_3866_5_74 84781 87873 + 1.B.14.6.1
TC HRGMv2_3866_5 HRGMv2_3866_5_75 87888 89507 + 8.A.46.1.6
Gene ID: HRGMv2_3866_5_72
Type: CAZyme
Location: 81036 - 83762 (+)
Gene ID: HRGMv2_3866_5_73
Type: pfam
Location: 83806 - 84573 (+)
Gene ID: HRGMv2_3866_5_74
Type: TC
Location: 84781 - 87873 (+)
Gene ID: HRGMv2_3866_5_75
Type: TC
Location: 87888 - 89507 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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