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Cluster: HRGMv2_3865_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3865_5 HRGMv2_3865_5_13 14219 16261 + 3.A.16.1.1
pfam HRGMv2_3865_5 HRGMv2_3865_5_14 16356 17222 + CTP_transf_1
TC HRGMv2_3865_5 HRGMv2_3865_5_15 17345 19807 - 1.B.14.1.4
STP HRGMv2_3865_5 HRGMv2_3865_5_16 20228 22489 - HD
CAZyme HRGMv2_3865_5 HRGMv2_3865_5_17 22715 24052 - GH23
pfam HRGMv2_3865_5 HRGMv2_3865_5_18 24083 24784 - DUF5683
TF HRGMv2_3865_5 HRGMv2_3865_5_19 24969 25877 - HTH_3
TC HRGMv2_3865_5 HRGMv2_3865_5_20 25951 26715 - 8.A.3.2.3
Gene ID: HRGMv2_3865_5_13
Type: TC
Location: 14219 - 16261 (+)
Gene ID: HRGMv2_3865_5_14
Type: pfam
Location: 16356 - 17222 (+)
Gene ID: HRGMv2_3865_5_15
Type: TC
Location: 17345 - 19807 (-)
Gene ID: HRGMv2_3865_5_16
Type: STP
Location: 20228 - 22489 (-)
Gene ID: HRGMv2_3865_5_17
Type: CAZyme
Location: 22715 - 24052 (-)
Gene ID: HRGMv2_3865_5_18
Type: pfam
Location: 24083 - 24784 (-)
Gene ID: HRGMv2_3865_5_19
Type: TF
Location: 24969 - 25877 (-)
Gene ID: HRGMv2_3865_5_20
Type: TC
Location: 25951 - 26715 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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