Cluster: HRGMv2_3865_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3865
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3865_64 | HRGMv2_3865_64_1 | 418 | 2586 | + | GH20 |
| pfam | HRGMv2_3865_64 | HRGMv2_3865_64_2 | 3212 | 5809 | + | Transglut_core | DUF553 |
| TC | HRGMv2_3865_64 | HRGMv2_3865_64_3 | 5813 | 6571 | + | 9.B.158.1.1 |
| NULL(UNKNOWN) | HRGMv2_3865_64 | HRGMv2_3865_64_4 | 6612 | 7733 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3865_64 | HRGMv2_3865_64_5 | 8295 | 9794 | - | GH33 |
| CAZyme | HRGMv2_3865_64 | HRGMv2_3865_64_6 | 10372 | 11127 | - | GH33 |
Gene ID: HRGMv2_3865_64_1
Type: CAZyme
Location: 418 - 2586 (+)
Type: CAZyme
Location: 418 - 2586 (+)
Gene ID: HRGMv2_3865_64_2
Type: pfam
Location: 3212 - 5809 (+)
Type: pfam
Location: 3212 - 5809 (+)
Gene ID: HRGMv2_3865_64_3
Type: TC
Location: 5813 - 6571 (+)
Type: TC
Location: 5813 - 6571 (+)
Gene ID: HRGMv2_3865_64_4
Type:
Location: 6612 - 7733 (+)
Type:
Location: 6612 - 7733 (+)
Gene ID: HRGMv2_3865_64_5
Type: CAZyme
Location: 8295 - 9794 (-)
Type: CAZyme
Location: 8295 - 9794 (-)
Gene ID: HRGMv2_3865_64_6
Type: CAZyme
Location: 10372 - 11127 (-)
Type: CAZyme
Location: 10372 - 11127 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella nanceiensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.