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Cluster: HRGMv2_3865_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3865_24 HRGMv2_3865_24_5 6687 7250 + 2.A.37.1.1
pfam HRGMv2_3865_24 HRGMv2_3865_24_6 7318 9522 + S1 | RNB | CSD2
CAZyme HRGMv2_3865_24 HRGMv2_3865_24_7 9799 10905 - GT4
pfam HRGMv2_3865_24 HRGMv2_3865_24_8 11028 11492 - MaoC_dehydratas
pfam HRGMv2_3865_24 HRGMv2_3865_24_9 11693 13186 + tRNA-synt_1e | DALR_2 | tRNA-synt_1g
CAZyme HRGMv2_3865_24 HRGMv2_3865_24_10 13247 14221 + GT2
pfam HRGMv2_3865_24 HRGMv2_3865_24_11 14350 14964 + DUF4254
CAZyme HRGMv2_3865_24 HRGMv2_3865_24_12 14968 16044 + GT9
Gene ID: HRGMv2_3865_24_5
Type: TC
Location: 6687 - 7250 (+)
Gene ID: HRGMv2_3865_24_6
Type: pfam
Location: 7318 - 9522 (+)
Gene ID: HRGMv2_3865_24_7
Type: CAZyme
Location: 9799 - 10905 (-)
Gene ID: HRGMv2_3865_24_8
Type: pfam
Location: 11028 - 11492 (-)
Gene ID: HRGMv2_3865_24_9
Type: pfam
Location: 11693 - 13186 (+)
Gene ID: HRGMv2_3865_24_10
Type: CAZyme
Location: 13247 - 14221 (+)
Gene ID: HRGMv2_3865_24_11
Type: pfam
Location: 14350 - 14964 (+)
Gene ID: HRGMv2_3865_24_12
Type: CAZyme
Location: 14968 - 16044 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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