dbCAN Logo

Cluster: HRGMv2_3862_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3862_2 HRGMv2_3862_2_54 59390 62851 + 1.B.14.6.1
TC HRGMv2_3862_2 HRGMv2_3862_2_55 62863 64314 + 8.A.46.3.2
peptidase HRGMv2_3862_2 HRGMv2_3862_2_56 64329 65510 + C01.UNA
TC HRGMv2_3862_2 HRGMv2_3862_2_57 66084 67586 - 2.A.36.6.11
TC HRGMv2_3862_2 HRGMv2_3862_2_58 67747 69999 + 2.A.37.1.5
pfam HRGMv2_3862_2 HRGMv2_3862_2_59 70239 72596 + FtsX | FtsX | MacB_PCD
NULL(UNKNOWN) HRGMv2_3862_2 HRGMv2_3862_2_60 72707 72913 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3862_2 HRGMv2_3862_2_61 73026 74165 + CBM32
CAZyme HRGMv2_3862_2 HRGMv2_3862_2_62 74183 76519 + GH92
CAZyme HRGMv2_3862_2 HRGMv2_3862_2_63 76712 79060 + GH92
Gene ID: HRGMv2_3862_2_54
Type: TC
Location: 59390 - 62851 (+)
Gene ID: HRGMv2_3862_2_55
Type: TC
Location: 62863 - 64314 (+)
Gene ID: HRGMv2_3862_2_56
Type: peptidase
Location: 64329 - 65510 (+)
Gene ID: HRGMv2_3862_2_57
Type: TC
Location: 66084 - 67586 (-)
Gene ID: HRGMv2_3862_2_58
Type: TC
Location: 67747 - 69999 (+)
Gene ID: HRGMv2_3862_2_59
Type: pfam
Location: 70239 - 72596 (+)
Gene ID: HRGMv2_3862_2_60
Type:
Location: 72707 - 72913 (-)
Gene ID: HRGMv2_3862_2_61
Type: CAZyme
Location: 73026 - 74165 (+)
Gene ID: HRGMv2_3862_2_62
Type: CAZyme
Location: 74183 - 76519 (+)
Gene ID: HRGMv2_3862_2_63
Type: CAZyme
Location: 76712 - 79060 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Marinifilaceae
→
Genus
Odoribacter
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List