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Cluster: HRGMv2_3862_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3862_15 HRGMv2_3862_15_4 2705 4300 - 8.A.46.1.1
TC HRGMv2_3862_15 HRGMv2_3862_15_5 4326 7298 - 1.B.14.6.1
CAZyme HRGMv2_3862_15 HRGMv2_3862_15_6 7694 10048 + GH13_45
CAZyme HRGMv2_3862_15 HRGMv2_3862_15_7 10111 11481 + GH13
TC HRGMv2_3862_15 HRGMv2_3862_15_8 11946 13304 + 2.A.2.6.2
pfam HRGMv2_3862_15 HRGMv2_3862_15_9 13316 13981 + Hydrolase | HAD_2
CAZyme HRGMv2_3862_15 HRGMv2_3862_15_10 14029 16335 + GH65
NULL(UNKNOWN) HRGMv2_3862_15 HRGMv2_3862_15_11 16335 16442 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3862_15 HRGMv2_3862_15_12 16399 18279 + GH13_46
CAZyme HRGMv2_3862_15 HRGMv2_3862_15_13 18442 19743 + GH13
Gene ID: HRGMv2_3862_15_4
Type: TC
Location: 2705 - 4300 (-)
Gene ID: HRGMv2_3862_15_5
Type: TC
Location: 4326 - 7298 (-)
Gene ID: HRGMv2_3862_15_6
Type: CAZyme
Location: 7694 - 10048 (+)
Gene ID: HRGMv2_3862_15_7
Type: CAZyme
Location: 10111 - 11481 (+)
Gene ID: HRGMv2_3862_15_8
Type: TC
Location: 11946 - 13304 (+)
Gene ID: HRGMv2_3862_15_9
Type: pfam
Location: 13316 - 13981 (+)
Gene ID: HRGMv2_3862_15_10
Type: CAZyme
Location: 14029 - 16335 (+)
Gene ID: HRGMv2_3862_15_11
Type:
Location: 16335 - 16442 (+)
Gene ID: HRGMv2_3862_15_12
Type: CAZyme
Location: 16399 - 18279 (+)
Gene ID: HRGMv2_3862_15_13
Type: CAZyme
Location: 18442 - 19743 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Marinifilaceae
→
Genus
Odoribacter
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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