Cluster: HRGMv2_3862_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3862
- CGC Family ID: CGCFAM_00595
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3862_1 | HRGMv2_3862_1_118 | 137164 | 140250 | + | 1.B.14.6.1 |
| TC | HRGMv2_3862_1 | HRGMv2_3862_1_119 | 140275 | 141798 | + | 8.A.46.1.6 |
| TC | HRGMv2_3862_1 | HRGMv2_3862_1_120 | 141899 | 142165 | + | 2.A.124.1.2 |
| TC | HRGMv2_3862_1 | HRGMv2_3862_1_121 | 142299 | 142901 | + | 2.A.124.1.2 |
| CAZyme | HRGMv2_3862_1 | HRGMv2_3862_1_122 | 142965 | 146108 | + | GH2 |
| CAZyme | HRGMv2_3862_1 | HRGMv2_3862_1_123 | 146140 | 148056 | + | GH63 |
Gene ID: HRGMv2_3862_1_118
Type: TC
Location: 137164 - 140250 (+)
Type: TC
Location: 137164 - 140250 (+)
Gene ID: HRGMv2_3862_1_119
Type: TC
Location: 140275 - 141798 (+)
Type: TC
Location: 140275 - 141798 (+)
Gene ID: HRGMv2_3862_1_120
Type: TC
Location: 141899 - 142165 (+)
Type: TC
Location: 141899 - 142165 (+)
Gene ID: HRGMv2_3862_1_121
Type: TC
Location: 142299 - 142901 (+)
Type: TC
Location: 142299 - 142901 (+)
Gene ID: HRGMv2_3862_1_122
Type: CAZyme
Location: 142965 - 146108 (+)
Type: CAZyme
Location: 142965 - 146108 (+)
Gene ID: HRGMv2_3862_1_123
Type: CAZyme
Location: 146140 - 148056 (+)
Type: CAZyme
Location: 146140 - 148056 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Marinifilaceae
Genus
Odoribacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.