Cluster: HRGMv2_3862_CGC28
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3862
- CGC Family ID: CGCFAM_01386
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3862_9 | HRGMv2_3862_9_138 | 158007 | 160388 | + | 9.A.8.1.6 |
| NULL(UNKNOWN) | HRGMv2_3862_9 | HRGMv2_3862_9_139 | 160762 | 161514 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3862_9 | HRGMv2_3862_9_140 | 161616 | 162998 | - | GH23 |
| pfam | HRGMv2_3862_9 | HRGMv2_3862_9_141 | 163092 | 165062 | - | Porin_10 |
| pfam | HRGMv2_3862_9 | HRGMv2_3862_9_142 | 165122 | 166828 | + | tRNA-synt_1c | tRNA-synt_1c_C | tRNA-synt_1c_C2 |
| TC | HRGMv2_3862_9 | HRGMv2_3862_9_143 | 166830 | 167711 | + | 2.A.115.1.1 |
Gene ID: HRGMv2_3862_9_138
Type: TC
Location: 158007 - 160388 (+)
Type: TC
Location: 158007 - 160388 (+)
Gene ID: HRGMv2_3862_9_139
Type:
Location: 160762 - 161514 (-)
Type:
Location: 160762 - 161514 (-)
Gene ID: HRGMv2_3862_9_140
Type: CAZyme
Location: 161616 - 162998 (-)
Type: CAZyme
Location: 161616 - 162998 (-)
Gene ID: HRGMv2_3862_9_141
Type: pfam
Location: 163092 - 165062 (-)
Type: pfam
Location: 163092 - 165062 (-)
Gene ID: HRGMv2_3862_9_142
Type: pfam
Location: 165122 - 166828 (+)
Type: pfam
Location: 165122 - 166828 (+)
Gene ID: HRGMv2_3862_9_143
Type: TC
Location: 166830 - 167711 (+)
Type: TC
Location: 166830 - 167711 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Marinifilaceae
Genus
Odoribacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.