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Cluster: HRGMv2_3862_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3862_9 HRGMv2_3862_9_12 13004 14305 - 2.A.1.31.4
pfam HRGMv2_3862_9 HRGMv2_3862_9_13 14573 15208 - LUD_dom
NULL(UNKNOWN) HRGMv2_3862_9 HRGMv2_3862_9_14 15466 16149 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3862_9 HRGMv2_3862_9_15 16326 17999 + 2.A.53.3.11
pfam HRGMv2_3862_9 HRGMv2_3862_9_16 18167 18613 + DUF2059
TC HRGMv2_3862_9 HRGMv2_3862_9_17 18712 20835 - 3.A.7.7.1
TC HRGMv2_3862_9 HRGMv2_3862_9_18 20918 21286 - 9.B.55.1.2
TC HRGMv2_3862_9 HRGMv2_3862_9_19 21369 22181 - 2.A.64.3.2
pfam HRGMv2_3862_9 HRGMv2_3862_9_20 22197 22376 - TatA_B_E
peptidase HRGMv2_3862_9 HRGMv2_3862_9_21 22507 23925 + C44.UNW
CAZyme HRGMv2_3862_9 HRGMv2_3862_9_22 24144 27242 + GH2
pfam HRGMv2_3862_9 HRGMv2_3862_9_23 27654 28772 - Cyt_bd_oxida_II
TC HRGMv2_3862_9 HRGMv2_3862_9_24 28813 30381 - 3.D.4.3.2
pfam HRGMv2_3862_9 HRGMv2_3862_9_25 30386 30595 - DUF4492
TC HRGMv2_3862_9 HRGMv2_3862_9_26 30749 31900 + 2.A.86.1.11
Gene ID: HRGMv2_3862_9_12
Type: TC
Location: 13004 - 14305 (-)
Gene ID: HRGMv2_3862_9_13
Type: pfam
Location: 14573 - 15208 (-)
Gene ID: HRGMv2_3862_9_14
Type:
Location: 15466 - 16149 (+)
Gene ID: HRGMv2_3862_9_15
Type: TC
Location: 16326 - 17999 (+)
Gene ID: HRGMv2_3862_9_16
Type: pfam
Location: 18167 - 18613 (+)
Gene ID: HRGMv2_3862_9_17
Type: TC
Location: 18712 - 20835 (-)
Gene ID: HRGMv2_3862_9_18
Type: TC
Location: 20918 - 21286 (-)
Gene ID: HRGMv2_3862_9_19
Type: TC
Location: 21369 - 22181 (-)
Gene ID: HRGMv2_3862_9_20
Type: pfam
Location: 22197 - 22376 (-)
Gene ID: HRGMv2_3862_9_21
Type: peptidase
Location: 22507 - 23925 (+)
Gene ID: HRGMv2_3862_9_22
Type: CAZyme
Location: 24144 - 27242 (+)
Gene ID: HRGMv2_3862_9_23
Type: pfam
Location: 27654 - 28772 (-)
Gene ID: HRGMv2_3862_9_24
Type: TC
Location: 28813 - 30381 (-)
Gene ID: HRGMv2_3862_9_25
Type: pfam
Location: 30386 - 30595 (-)
Gene ID: HRGMv2_3862_9_26
Type: TC
Location: 30749 - 31900 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Marinifilaceae
→
Genus
Odoribacter
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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