Cluster: HRGMv2_3862_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3862
- CGC Family ID: CGCFAM_03995
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3862_5 | HRGMv2_3862_5_53 | 66153 | 68204 | + | GH20 |
| TC | HRGMv2_3862_5 | HRGMv2_3862_5_54 | 68424 | 70646 | + | 3.A.3.5.30 |
| NULL(UNKNOWN) | HRGMv2_3862_5 | HRGMv2_3862_5_55 | 71011 | 71241 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_3862_5 | HRGMv2_3862_5_56 | 71268 | 71750 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3862_5 | HRGMv2_3862_5_57 | 72135 | 73568 | + | GH109 |
| CAZyme | HRGMv2_3862_5 | HRGMv2_3862_5_58 | 73751 | 76105 | + | GH95 |
Gene ID: HRGMv2_3862_5_53
Type: CAZyme
Location: 66153 - 68204 (+)
Type: CAZyme
Location: 66153 - 68204 (+)
Gene ID: HRGMv2_3862_5_54
Type: TC
Location: 68424 - 70646 (+)
Type: TC
Location: 68424 - 70646 (+)
Gene ID: HRGMv2_3862_5_55
Type:
Location: 71011 - 71241 (+)
Type:
Location: 71011 - 71241 (+)
Gene ID: HRGMv2_3862_5_56
Type:
Location: 71268 - 71750 (+)
Type:
Location: 71268 - 71750 (+)
Gene ID: HRGMv2_3862_5_57
Type: CAZyme
Location: 72135 - 73568 (+)
Type: CAZyme
Location: 72135 - 73568 (+)
Gene ID: HRGMv2_3862_5_58
Type: CAZyme
Location: 73751 - 76105 (+)
Type: CAZyme
Location: 73751 - 76105 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Marinifilaceae
Genus
Odoribacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.