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Cluster: HRGMv2_3860_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3860_9 HRGMv2_3860_9_10 9663 10271 - 9.B.18.1.2
CAZyme HRGMv2_3860_9 HRGMv2_3860_9_11 10635 11801 - GT4
pfam HRGMv2_3860_9 HRGMv2_3860_9_12 11805 12788 - EpsG
pfam HRGMv2_3860_9 HRGMv2_3860_9_13 12998 13654 - DUF1919
CAZyme HRGMv2_3860_9 HRGMv2_3860_9_14 13659 14720 - GT4
CAZyme HRGMv2_3860_9 HRGMv2_3860_9_15 14717 15667 - GT8
CAZyme HRGMv2_3860_9 HRGMv2_3860_9_16 15664 16788 - GT4
CAZyme HRGMv2_3860_9 HRGMv2_3860_9_17 16790 17605 - GT2
Gene ID: HRGMv2_3860_9_10
Type: TC
Location: 9663 - 10271 (-)
Gene ID: HRGMv2_3860_9_11
Type: CAZyme
Location: 10635 - 11801 (-)
Gene ID: HRGMv2_3860_9_12
Type: pfam
Location: 11805 - 12788 (-)
Gene ID: HRGMv2_3860_9_13
Type: pfam
Location: 12998 - 13654 (-)
Gene ID: HRGMv2_3860_9_14
Type: CAZyme
Location: 13659 - 14720 (-)
Gene ID: HRGMv2_3860_9_15
Type: CAZyme
Location: 14717 - 15667 (-)
Gene ID: HRGMv2_3860_9_16
Type: CAZyme
Location: 15664 - 16788 (-)
Gene ID: HRGMv2_3860_9_17
Type: CAZyme
Location: 16790 - 17605 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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