Cluster: HRGMv2_3860_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3860
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3860_3 | HRGMv2_3860_3_6 | 6150 | 7403 | + | 9.B.146.1.6 |
| pfam | HRGMv2_3860_3 | HRGMv2_3860_3_7 | 7407 | 8774 | + | Mur_ligase_C | Mur_ligase_M | MurD_N | MurD-like_N |
| TC | HRGMv2_3860_3 | HRGMv2_3860_3_8 | 8798 | 10123 | + | 2.A.103.1.3 |
| CAZyme | HRGMv2_3860_3 | HRGMv2_3860_3_9 | 10164 | 11270 | + | GT28 |
Gene ID: HRGMv2_3860_3_6
Type: TC
Location: 6150 - 7403 (+)
Type: TC
Location: 6150 - 7403 (+)
Gene ID: HRGMv2_3860_3_7
Type: pfam
Location: 7407 - 8774 (+)
Type: pfam
Location: 7407 - 8774 (+)
Gene ID: HRGMv2_3860_3_8
Type: TC
Location: 8798 - 10123 (+)
Type: TC
Location: 8798 - 10123 (+)
Gene ID: HRGMv2_3860_3_9
Type: CAZyme
Location: 10164 - 11270 (+)
Type: CAZyme
Location: 10164 - 11270 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-873
Species
CAG-873 sp937995285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.