Cluster: HRGMv2_3860_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3860
- CGC Family ID: CGCFAM_00227
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3860_61 | HRGMv2_3860_61_8 | 6093 | 7970 | - | 1.C.39.4.5 |
| pfam | HRGMv2_3860_61 | HRGMv2_3860_61_9 | 7995 | 8414 | - | YbeY |
| CAZyme | HRGMv2_3860_61 | HRGMv2_3860_61_10 | 8764 | 9528 | + | GT2 |
| CAZyme | HRGMv2_3860_61 | HRGMv2_3860_61_11 | 9528 | 10622 | + | GT4 |
| pfam | HRGMv2_3860_61 | HRGMv2_3860_61_12 | 10606 | 11331 | + | Kdo |
| CAZyme | HRGMv2_3860_61 | HRGMv2_3860_61_13 | 11577 | 13109 | + | GH13_42 |
Gene ID: HRGMv2_3860_61_8
Type: TC
Location: 6093 - 7970 (-)
Type: TC
Location: 6093 - 7970 (-)
Gene ID: HRGMv2_3860_61_9
Type: pfam
Location: 7995 - 8414 (-)
Type: pfam
Location: 7995 - 8414 (-)
Gene ID: HRGMv2_3860_61_10
Type: CAZyme
Location: 8764 - 9528 (+)
Type: CAZyme
Location: 8764 - 9528 (+)
Gene ID: HRGMv2_3860_61_11
Type: CAZyme
Location: 9528 - 10622 (+)
Type: CAZyme
Location: 9528 - 10622 (+)
Gene ID: HRGMv2_3860_61_12
Type: pfam
Location: 10606 - 11331 (+)
Type: pfam
Location: 10606 - 11331 (+)
Gene ID: HRGMv2_3860_61_13
Type: CAZyme
Location: 11577 - 13109 (+)
Type: CAZyme
Location: 11577 - 13109 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-873
Species
CAG-873 sp937995285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.