Cluster: HRGMv2_3860_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3860
- CGC Family ID: CGCFAM_01656
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3860_45 | HRGMv2_3860_45_9 | 8118 | 10097 | + | 3.A.1.121.4 |
| TF | HRGMv2_3860_45 | HRGMv2_3860_45_10 | 10103 | 10447 | - | MerR |
| TC | HRGMv2_3860_45 | HRGMv2_3860_45_11 | 10459 | 11430 | - | 1.A.34.1.3 |
| pfam | HRGMv2_3860_45 | HRGMv2_3860_45_12 | 11565 | 14192 | + | tRNA-synt_2c | DHHA1 | tRNA_SAD |
| CAZyme | HRGMv2_3860_45 | HRGMv2_3860_45_13 | 14204 | 15022 | + | CE1 |
Gene ID: HRGMv2_3860_45_9
Type: TC
Location: 8118 - 10097 (+)
Type: TC
Location: 8118 - 10097 (+)
Gene ID: HRGMv2_3860_45_10
Type: TF
Location: 10103 - 10447 (-)
Type: TF
Location: 10103 - 10447 (-)
Gene ID: HRGMv2_3860_45_11
Type: TC
Location: 10459 - 11430 (-)
Type: TC
Location: 10459 - 11430 (-)
Gene ID: HRGMv2_3860_45_12
Type: pfam
Location: 11565 - 14192 (+)
Type: pfam
Location: 11565 - 14192 (+)
Gene ID: HRGMv2_3860_45_13
Type: CAZyme
Location: 14204 - 15022 (+)
Type: CAZyme
Location: 14204 - 15022 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-873
Species
CAG-873 sp937995285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.