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Cluster: HRGMv2_3860_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3860_21 HRGMv2_3860_21_4 4948 7590 + CBM20 | CBM20 | GH77
TC HRGMv2_3860_21 HRGMv2_3860_21_5 7741 8601 + 8.A.5.1.6
pfam HRGMv2_3860_21 HRGMv2_3860_21_6 8614 9453 + adh_short | KR | adh_short_C2 | adh_short_C2
STP HRGMv2_3860_21 HRGMv2_3860_21_7 9622 10809 + Aminotran_1_2
TC HRGMv2_3860_21 HRGMv2_3860_21_8 10968 11936 + 3.A.1.124.6
pfam HRGMv2_3860_21 HRGMv2_3860_21_9 11933 13195 + ABC2_membrane_3
CAZyme HRGMv2_3860_21 HRGMv2_3860_21_10 13273 15582 - GH3
Gene ID: HRGMv2_3860_21_4
Type: CAZyme
Location: 4948 - 7590 (+)
Gene ID: HRGMv2_3860_21_5
Type: TC
Location: 7741 - 8601 (+)
Gene ID: HRGMv2_3860_21_6
Type: pfam
Location: 8614 - 9453 (+)
Gene ID: HRGMv2_3860_21_7
Type: STP
Location: 9622 - 10809 (+)
Gene ID: HRGMv2_3860_21_8
Type: TC
Location: 10968 - 11936 (+)
Gene ID: HRGMv2_3860_21_9
Type: pfam
Location: 11933 - 13195 (+)
Gene ID: HRGMv2_3860_21_10
Type: CAZyme
Location: 13273 - 15582 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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