Cluster: HRGMv2_3860_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3860
- CGC Family ID: CGCFAM_00643
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3860_15 | HRGMv2_3860_15_16 | 14279 | 15457 | - | GT4 |
| pfam | HRGMv2_3860_15 | HRGMv2_3860_15_17 | 15643 | 17376 | + | Transketolase_N | E1_dh | TPP_enzyme_C | Transket_pyr | Transketolase_C | DXP_synthase_N | DXP_synthase_N |
| pfam | HRGMv2_3860_15 | HRGMv2_3860_15_18 | 17492 | 18766 | + | Fic | DUF4172 |
| TC | HRGMv2_3860_15 | HRGMv2_3860_15_19 | 18970 | 21846 | + | 2.A.6.4.3 |
Gene ID: HRGMv2_3860_15_16
Type: CAZyme
Location: 14279 - 15457 (-)
Type: CAZyme
Location: 14279 - 15457 (-)
Gene ID: HRGMv2_3860_15_17
Type: pfam
Location: 15643 - 17376 (+)
Type: pfam
Location: 15643 - 17376 (+)
Gene ID: HRGMv2_3860_15_18
Type: pfam
Location: 17492 - 18766 (+)
Type: pfam
Location: 17492 - 18766 (+)
Gene ID: HRGMv2_3860_15_19
Type: TC
Location: 18970 - 21846 (+)
Type: TC
Location: 18970 - 21846 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-873
Species
CAG-873 sp937995285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.