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Cluster: HRGMv2_3850_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3850_6 HRGMv2_3850_6_27 23253 24437 + GT1
NULL(UNKNOWN) HRGMv2_3850_6 HRGMv2_3850_6_28 24476 24661 - NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_3850_6 HRGMv2_3850_6_29 24849 25655 + HEM4
TC HRGMv2_3850_6 HRGMv2_3850_6_30 25681 26442 - 3.A.1.139.2
TC HRGMv2_3850_6 HRGMv2_3850_6_31 26444 27181 - 3.A.1.7.5
Gene ID: HRGMv2_3850_6_27
Type: CAZyme
Location: 23253 - 24437 (+)
Gene ID: HRGMv2_3850_6_28
Type:
Location: 24476 - 24661 (-)
Gene ID: HRGMv2_3850_6_29
Type: STP
Location: 24849 - 25655 (+)
Gene ID: HRGMv2_3850_6_30
Type: TC
Location: 25681 - 26442 (-)
Gene ID: HRGMv2_3850_6_31
Type: TC
Location: 26444 - 27181 (-)

Taxonomic Lineage

Domain
Bacteria
Class
Bacilli

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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