Cluster: HRGMv2_3850_CGC7
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3850
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3850_6 | HRGMv2_3850_6_11 | 9447 | 11153 | - | 4.A.3.1.1 |
| TC | HRGMv2_3850_6 | HRGMv2_3850_6_12 | 11165 | 11479 | - | 4.A.3.1.2 |
| CAZyme | HRGMv2_3850_6 | HRGMv2_3850_6_13 | 11542 | 12942 | - | GH1 |
| TF | HRGMv2_3850_6 | HRGMv2_3850_6_14 | 13189 | 13956 | + | HTH_DeoR |
| pfam | HRGMv2_3850_6 | HRGMv2_3850_6_15 | 13974 | 14657 | + | Hydrolase | HAD_2 |
| TC | HRGMv2_3850_6 | HRGMv2_3850_6_16 | 14791 | 15180 | - | 9.B.72.1.7 |
| TF | HRGMv2_3850_6 | HRGMv2_3850_6_17 | 15164 | 15589 | - | MarR |
| TC | HRGMv2_3850_6 | HRGMv2_3850_6_18 | 15950 | 16585 | + | 9.B.20.1.4 |
Gene ID: HRGMv2_3850_6_11
Type: TC
Location: 9447 - 11153 (-)
Type: TC
Location: 9447 - 11153 (-)
Gene ID: HRGMv2_3850_6_12
Type: TC
Location: 11165 - 11479 (-)
Type: TC
Location: 11165 - 11479 (-)
Gene ID: HRGMv2_3850_6_13
Type: CAZyme
Location: 11542 - 12942 (-)
Type: CAZyme
Location: 11542 - 12942 (-)
Gene ID: HRGMv2_3850_6_14
Type: TF
Location: 13189 - 13956 (+)
Type: TF
Location: 13189 - 13956 (+)
Gene ID: HRGMv2_3850_6_15
Type: pfam
Location: 13974 - 14657 (+)
Type: pfam
Location: 13974 - 14657 (+)
Gene ID: HRGMv2_3850_6_16
Type: TC
Location: 14791 - 15180 (-)
Type: TC
Location: 14791 - 15180 (-)
Gene ID: HRGMv2_3850_6_17
Type: TF
Location: 15164 - 15589 (-)
Type: TF
Location: 15164 - 15589 (-)
Gene ID: HRGMv2_3850_6_18
Type: TC
Location: 15950 - 16585 (+)
Type: TC
Location: 15950 - 16585 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Bacillales
Family
Bacillaceae
Genus
Bacillus
Species
Bacillus velezensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.