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Cluster: HRGMv2_3850_CGC51

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3850_100 HRGMv2_3850_100_5 3773 5002 + 2.A.11.1.2
CAZyme HRGMv2_3850_100 HRGMv2_3850_100_6 5064 5795 - GH16_21
TC HRGMv2_3850_100 HRGMv2_3850_100_7 6412 7659 + 2.A.1.24.4
TC HRGMv2_3850_100 HRGMv2_3850_100_8 7691 9130 - 3.A.18.1.1
Gene ID: HRGMv2_3850_100_5
Type: TC
Location: 3773 - 5002 (+)
Gene ID: HRGMv2_3850_100_6
Type: CAZyme
Location: 5064 - 5795 (-)
Gene ID: HRGMv2_3850_100_7
Type: TC
Location: 6412 - 7659 (+)
Gene ID: HRGMv2_3850_100_8
Type: TC
Location: 7691 - 9130 (-)

Taxonomic Lineage

Domain
Bacteria
Class
Bacilli

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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