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Cluster: HRGMv2_3850_CGC50

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3850_93 HRGMv2_3850_93_1 138 1817 + GH13_31
TC HRGMv2_3850_93 HRGMv2_3850_93_2 1958 2968 + 3.A.1.15.11
TC HRGMv2_3850_93 HRGMv2_3850_93_3 3023 3718 + 3.A.1.15.11
TC HRGMv2_3850_93 HRGMv2_3850_93_4 3682 4515 + 3.A.1.15.11
Gene ID: HRGMv2_3850_93_1
Type: CAZyme
Location: 138 - 1817 (+)
Gene ID: HRGMv2_3850_93_2
Type: TC
Location: 1958 - 2968 (+)
Gene ID: HRGMv2_3850_93_3
Type: TC
Location: 3023 - 3718 (+)
Gene ID: HRGMv2_3850_93_4
Type: TC
Location: 3682 - 4515 (+)

Taxonomic Lineage

Domain
Bacteria
Class
Bacilli

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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