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Cluster: HRGMv2_3850_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3850_5 HRGMv2_3850_5_92 91860 93626 + CBM34 | GH13_20
TC HRGMv2_3850_5 HRGMv2_3850_5_93 93720 94976 + 3.A.1.1.26
TC HRGMv2_3850_5 HRGMv2_3850_5_94 95016 96326 + 3.A.1.1.26
TC HRGMv2_3850_5 HRGMv2_3850_5_95 96327 96614 + 3.A.1.1.26
Gene ID: HRGMv2_3850_5_92
Type: CAZyme
Location: 91860 - 93626 (+)
Gene ID: HRGMv2_3850_5_93
Type: TC
Location: 93720 - 94976 (+)
Gene ID: HRGMv2_3850_5_94
Type: TC
Location: 95016 - 96326 (+)
Gene ID: HRGMv2_3850_5_95
Type: TC
Location: 96327 - 96614 (+)

Taxonomic Lineage

Domain
Bacteria
Class
Bacilli

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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