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Cluster: HRGMv2_3850_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3850_32 HRGMv2_3850_32_24 26342 28483 - GT51
pfam HRGMv2_3850_32 HRGMv2_3850_32_25 28606 29106 + ABM
TC HRGMv2_3850_32 HRGMv2_3850_32_26 29225 30610 + 2.A.45.3.1
peptidase HRGMv2_3850_32 HRGMv2_3850_32_27 30679 31866 + M20.UPD
TC HRGMv2_3850_32 HRGMv2_3850_32_28 31897 32601 - 3.A.1.143.1
TC HRGMv2_3850_32 HRGMv2_3850_32_29 32644 33870 - 3.A.1.143.1
TC HRGMv2_3850_32 HRGMv2_3850_32_30 33863 34606 - 3.A.1.143.1
pfam HRGMv2_3850_32 HRGMv2_3850_32_31 35098 35535 + HIT | DcpS_C
pfam HRGMv2_3850_32 HRGMv2_3850_32_32 35672 36751 + Aminotran_5
TC HRGMv2_3850_32 HRGMv2_3850_32_33 36872 37390 + 2.A.88.4.1
Gene ID: HRGMv2_3850_32_24
Type: CAZyme
Location: 26342 - 28483 (-)
Gene ID: HRGMv2_3850_32_25
Type: pfam
Location: 28606 - 29106 (+)
Gene ID: HRGMv2_3850_32_26
Type: TC
Location: 29225 - 30610 (+)
Gene ID: HRGMv2_3850_32_27
Type: peptidase
Location: 30679 - 31866 (+)
Gene ID: HRGMv2_3850_32_28
Type: TC
Location: 31897 - 32601 (-)
Gene ID: HRGMv2_3850_32_29
Type: TC
Location: 32644 - 33870 (-)
Gene ID: HRGMv2_3850_32_30
Type: TC
Location: 33863 - 34606 (-)
Gene ID: HRGMv2_3850_32_31
Type: pfam
Location: 35098 - 35535 (+)
Gene ID: HRGMv2_3850_32_32
Type: pfam
Location: 35672 - 36751 (+)
Gene ID: HRGMv2_3850_32_33
Type: TC
Location: 36872 - 37390 (+)

Taxonomic Lineage

Domain
Bacteria
Class
Bacilli

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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