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Cluster: HRGMv2_3850_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3850_20 HRGMv2_3850_20_10 7793 9121 - GH4
TC HRGMv2_3850_20 HRGMv2_3850_20_11 9118 9450 - 4.A.3.2.2
TC HRGMv2_3850_20 HRGMv2_3850_20_12 9469 10827 - 4.A.3.2.2
TC HRGMv2_3850_20 HRGMv2_3850_20_13 10843 11151 - 4.A.3.2.2
TF HRGMv2_3850_20 HRGMv2_3850_20_14 11250 13205 - HTH_11 | Mga
pfam HRGMv2_3850_20 HRGMv2_3850_20_15 13538 14128 - Pur_DNA_glyco
TC HRGMv2_3850_20 HRGMv2_3850_20_16 14340 15368 + 3.A.1.14.7
TC HRGMv2_3850_20 HRGMv2_3850_20_17 15369 16382 + 3.A.1.14.15
STP HRGMv2_3850_20 HRGMv2_3850_20_18 16399 17295 + Peripla_BP_2
TF HRGMv2_3850_20 HRGMv2_3850_20_19 17398 17748 + HTH_5
TC HRGMv2_3850_20 HRGMv2_3850_20_20 17762 19060 + 2.A.45.1.1
TC HRGMv2_3850_20 HRGMv2_3850_20_21 19213 19524 + 4.A.3.2.6
TC HRGMv2_3850_20 HRGMv2_3850_20_22 19539 19856 + 4.A.3.2.8
TC HRGMv2_3850_20 HRGMv2_3850_20_23 19875 21194 + 4.A.3.2.8
CAZyme HRGMv2_3850_20 HRGMv2_3850_20_24 21224 22624 + GH1
pfam HRGMv2_3850_20 HRGMv2_3850_20_25 22644 23525 + ROK
pfam HRGMv2_3850_20 HRGMv2_3850_20_26 23522 24466 + PMI_typeI_C | PMI_typeI_cat | MPI_cupin_dom
CAZyme HRGMv2_3850_20 HRGMv2_3850_20_27 24486 25568 + GH26
pfam HRGMv2_3850_20 HRGMv2_3850_20_28 25646 27259 + Catalase | Catalase-rel
peptidase HRGMv2_3850_20 HRGMv2_3850_20_29 27299 28285 - C59.001
TC HRGMv2_3850_20 HRGMv2_3850_20_30 28602 29960 + 2.A.39.1.5
pfam HRGMv2_3850_20 HRGMv2_3850_20_31 29974 30804 - Carb_kinase
TC HRGMv2_3850_20 HRGMv2_3850_20_32 30895 32625 - 3.A.1.129.1
TC HRGMv2_3850_20 HRGMv2_3850_20_33 32622 34325 - 3.A.1.129.1
TC HRGMv2_3850_20 HRGMv2_3850_20_34 34325 35341 - 3.D.4.3.2
TC HRGMv2_3850_20 HRGMv2_3850_20_35 35325 36731 - 3.D.4.3.2
TC HRGMv2_3850_20 HRGMv2_3850_20_36 37234 38577 + 2.A.24.2.4
CAZyme HRGMv2_3850_20 HRGMv2_3850_20_37 38613 39455 - CE4
TC HRGMv2_3850_20 HRGMv2_3850_20_38 39555 40655 - 3.A.1.1.26
TF HRGMv2_3850_20 HRGMv2_3850_20_39 40773 41666 - 0037176
TC HRGMv2_3850_20 HRGMv2_3850_20_40 41825 42661 - 2.A.115.1.2
Gene ID: HRGMv2_3850_20_10
Type: CAZyme
Location: 7793 - 9121 (-)
Gene ID: HRGMv2_3850_20_11
Type: TC
Location: 9118 - 9450 (-)
Gene ID: HRGMv2_3850_20_12
Type: TC
Location: 9469 - 10827 (-)
Gene ID: HRGMv2_3850_20_13
Type: TC
Location: 10843 - 11151 (-)
Gene ID: HRGMv2_3850_20_14
Type: TF
Location: 11250 - 13205 (-)
Gene ID: HRGMv2_3850_20_15
Type: pfam
Location: 13538 - 14128 (-)
Gene ID: HRGMv2_3850_20_16
Type: TC
Location: 14340 - 15368 (+)
Gene ID: HRGMv2_3850_20_17
Type: TC
Location: 15369 - 16382 (+)
Gene ID: HRGMv2_3850_20_18
Type: STP
Location: 16399 - 17295 (+)
Gene ID: HRGMv2_3850_20_19
Type: TF
Location: 17398 - 17748 (+)
Gene ID: HRGMv2_3850_20_20
Type: TC
Location: 17762 - 19060 (+)
Gene ID: HRGMv2_3850_20_21
Type: TC
Location: 19213 - 19524 (+)
Gene ID: HRGMv2_3850_20_22
Type: TC
Location: 19539 - 19856 (+)
Gene ID: HRGMv2_3850_20_23
Type: TC
Location: 19875 - 21194 (+)
Gene ID: HRGMv2_3850_20_24
Type: CAZyme
Location: 21224 - 22624 (+)
Gene ID: HRGMv2_3850_20_25
Type: pfam
Location: 22644 - 23525 (+)
Gene ID: HRGMv2_3850_20_26
Type: pfam
Location: 23522 - 24466 (+)
Gene ID: HRGMv2_3850_20_27
Type: CAZyme
Location: 24486 - 25568 (+)
Gene ID: HRGMv2_3850_20_28
Type: pfam
Location: 25646 - 27259 (+)
Gene ID: HRGMv2_3850_20_29
Type: peptidase
Location: 27299 - 28285 (-)
Gene ID: HRGMv2_3850_20_30
Type: TC
Location: 28602 - 29960 (+)
Gene ID: HRGMv2_3850_20_31
Type: pfam
Location: 29974 - 30804 (-)
Gene ID: HRGMv2_3850_20_32
Type: TC
Location: 30895 - 32625 (-)
Gene ID: HRGMv2_3850_20_33
Type: TC
Location: 32622 - 34325 (-)
Gene ID: HRGMv2_3850_20_34
Type: TC
Location: 34325 - 35341 (-)
Gene ID: HRGMv2_3850_20_35
Type: TC
Location: 35325 - 36731 (-)
Gene ID: HRGMv2_3850_20_36
Type: TC
Location: 37234 - 38577 (+)
Gene ID: HRGMv2_3850_20_37
Type: CAZyme
Location: 38613 - 39455 (-)
Gene ID: HRGMv2_3850_20_38
Type: TC
Location: 39555 - 40655 (-)
Gene ID: HRGMv2_3850_20_39
Type: TF
Location: 40773 - 41666 (-)
Gene ID: HRGMv2_3850_20_40
Type: TC
Location: 41825 - 42661 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Bacillales
→
Family
Bacillaceae
→
Genus
Bacillus
→
Species
Bacillus velezensis

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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