Cluster: HRGMv2_3850_CGC16
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3850
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3850_16 | HRGMv2_3850_16_43 | 34554 | 35387 | - | 3.A.1.17.2 |
| TC | HRGMv2_3850_16 | HRGMv2_3850_16_44 | 35387 | 36376 | - | 3.A.1.17.2 |
| TC | HRGMv2_3850_16 | HRGMv2_3850_16_45 | 36392 | 37159 | - | 3.A.1.17.1 |
| pfam | HRGMv2_3850_16 | HRGMv2_3850_16_46 | 37382 | 38317 | - | Amidohydro_2 |
| pfam | HRGMv2_3850_16 | HRGMv2_3850_16_47 | 38574 | 40019 | + | Catalase | Catalase-rel |
| TC | HRGMv2_3850_16 | HRGMv2_3850_16_48 | 40091 | 41056 | - | 3.A.1.5.20 |
| TC | HRGMv2_3850_16 | HRGMv2_3850_16_49 | 41049 | 42035 | - | 3.A.1.5.20 |
| TC | HRGMv2_3850_16 | HRGMv2_3850_16_50 | 42032 | 42937 | - | 3.A.1.5.20 |
| TC | HRGMv2_3850_16 | HRGMv2_3850_16_51 | 42950 | 43906 | - | 3.A.1.5.20 |
| TC | HRGMv2_3850_16 | HRGMv2_3850_16_52 | 43975 | 45633 | - | 3.A.1.5.27 |
| pfam | HRGMv2_3850_16 | HRGMv2_3850_16_53 | 45636 | 45815 | - | Fur_reg_FbpB |
| CAZyme | HRGMv2_3850_16 | HRGMv2_3850_16_54 | 46057 | 47430 | + | AA7 |
Gene ID: HRGMv2_3850_16_43
Type: TC
Location: 34554 - 35387 (-)
Type: TC
Location: 34554 - 35387 (-)
Gene ID: HRGMv2_3850_16_44
Type: TC
Location: 35387 - 36376 (-)
Type: TC
Location: 35387 - 36376 (-)
Gene ID: HRGMv2_3850_16_45
Type: TC
Location: 36392 - 37159 (-)
Type: TC
Location: 36392 - 37159 (-)
Gene ID: HRGMv2_3850_16_46
Type: pfam
Location: 37382 - 38317 (-)
Type: pfam
Location: 37382 - 38317 (-)
Gene ID: HRGMv2_3850_16_47
Type: pfam
Location: 38574 - 40019 (+)
Type: pfam
Location: 38574 - 40019 (+)
Gene ID: HRGMv2_3850_16_48
Type: TC
Location: 40091 - 41056 (-)
Type: TC
Location: 40091 - 41056 (-)
Gene ID: HRGMv2_3850_16_49
Type: TC
Location: 41049 - 42035 (-)
Type: TC
Location: 41049 - 42035 (-)
Gene ID: HRGMv2_3850_16_50
Type: TC
Location: 42032 - 42937 (-)
Type: TC
Location: 42032 - 42937 (-)
Gene ID: HRGMv2_3850_16_51
Type: TC
Location: 42950 - 43906 (-)
Type: TC
Location: 42950 - 43906 (-)
Gene ID: HRGMv2_3850_16_52
Type: TC
Location: 43975 - 45633 (-)
Type: TC
Location: 43975 - 45633 (-)
Gene ID: HRGMv2_3850_16_53
Type: pfam
Location: 45636 - 45815 (-)
Type: pfam
Location: 45636 - 45815 (-)
Gene ID: HRGMv2_3850_16_54
Type: CAZyme
Location: 46057 - 47430 (+)
Type: CAZyme
Location: 46057 - 47430 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Bacillales
Family
Bacillaceae
Genus
Bacillus
Species
Bacillus velezensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.