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Cluster: HRGMv2_3834_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3834_2 HRGMv2_3834_2_63 74253 75620 + 2.A.6.6.11
pfam HRGMv2_3834_2 HRGMv2_3834_2_64 75634 76848 + Chal_sti_synt_N | HMG_CoA_synt_N | HMG_CoA_synt_C
TC HRGMv2_3834_2 HRGMv2_3834_2_65 77282 78913 - 1.I.1.1.3
pfam HRGMv2_3834_2 HRGMv2_3834_2_66 79266 80474 - Glucodextran_C
CAZyme HRGMv2_3834_2 HRGMv2_3834_2_67 80471 81712 - GH49
NULL(UNKNOWN) HRGMv2_3834_2 HRGMv2_3834_2_68 81824 82546 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3834_2 HRGMv2_3834_2_69 82676 84496 + GH13_31
TC HRGMv2_3834_2 HRGMv2_3834_2_70 84514 85473 + 3.A.1.1.10
Gene ID: HRGMv2_3834_2_63
Type: TC
Location: 74253 - 75620 (+)
Gene ID: HRGMv2_3834_2_64
Type: pfam
Location: 75634 - 76848 (+)
Gene ID: HRGMv2_3834_2_65
Type: TC
Location: 77282 - 78913 (-)
Gene ID: HRGMv2_3834_2_66
Type: pfam
Location: 79266 - 80474 (-)
Gene ID: HRGMv2_3834_2_67
Type: CAZyme
Location: 80471 - 81712 (-)
Gene ID: HRGMv2_3834_2_68
Type:
Location: 81824 - 82546 (+)
Gene ID: HRGMv2_3834_2_69
Type: CAZyme
Location: 82676 - 84496 (+)
Gene ID: HRGMv2_3834_2_70
Type: TC
Location: 84514 - 85473 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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