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Cluster: HRGMv2_3834_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3834_2 HRGMv2_3834_2_32 35617 36270 + 3.A.1.18.3
NULL(UNKNOWN) HRGMv2_3834_2 HRGMv2_3834_2_33 36267 36959 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3834_2 HRGMv2_3834_2_34 36941 38494 + 3.A.1.18.3
pfam HRGMv2_3834_2 HRGMv2_3834_2_35 38693 39571 + Aldo_ket_red
pfam HRGMv2_3834_2 HRGMv2_3834_2_36 39586 40320 + GmrSD_C
TC HRGMv2_3834_2 HRGMv2_3834_2_37 40439 42169 - 2.A.1.3.39
TC HRGMv2_3834_2 HRGMv2_3834_2_38 42313 43746 - 9.B.18.1.2
pfam HRGMv2_3834_2 HRGMv2_3834_2_39 44286 46106 + DUF4012
pfam HRGMv2_3834_2 HRGMv2_3834_2_40 46148 46717 + LMWPc
TC HRGMv2_3834_2 HRGMv2_3834_2_41 46889 48310 + 8.A.3.1.2
NULL(UNKNOWN) HRGMv2_3834_2 HRGMv2_3834_2_42 48353 49858 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3834_2 HRGMv2_3834_2_43 50199 51218 - GH23
Gene ID: HRGMv2_3834_2_32
Type: TC
Location: 35617 - 36270 (+)
Gene ID: HRGMv2_3834_2_33
Type:
Location: 36267 - 36959 (+)
Gene ID: HRGMv2_3834_2_34
Type: TC
Location: 36941 - 38494 (+)
Gene ID: HRGMv2_3834_2_35
Type: pfam
Location: 38693 - 39571 (+)
Gene ID: HRGMv2_3834_2_36
Type: pfam
Location: 39586 - 40320 (+)
Gene ID: HRGMv2_3834_2_37
Type: TC
Location: 40439 - 42169 (-)
Gene ID: HRGMv2_3834_2_38
Type: TC
Location: 42313 - 43746 (-)
Gene ID: HRGMv2_3834_2_39
Type: pfam
Location: 44286 - 46106 (+)
Gene ID: HRGMv2_3834_2_40
Type: pfam
Location: 46148 - 46717 (+)
Gene ID: HRGMv2_3834_2_41
Type: TC
Location: 46889 - 48310 (+)
Gene ID: HRGMv2_3834_2_42
Type:
Location: 48353 - 49858 (+)
Gene ID: HRGMv2_3834_2_43
Type: CAZyme
Location: 50199 - 51218 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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