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Cluster: HRGMv2_3834_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3834_39 HRGMv2_3834_39_1 3 1151 + GH1
CAZyme HRGMv2_3834_39 HRGMv2_3834_39_2 1236 3551 + GH3
pfam HRGMv2_3834_39 HRGMv2_3834_39_3 3685 4824 - Lipase_GDSL_2 | Lipase_GDSL_3
CAZyme HRGMv2_3834_39 HRGMv2_3834_39_4 4947 6518 + GH20
pfam HRGMv2_3834_39 HRGMv2_3834_39_5 6552 7370 + H2O2_YaaD
TC HRGMv2_3834_39 HRGMv2_3834_39_6 7403 8347 - 2.A.3.7.3
NULL(UNKNOWN) HRGMv2_3834_39 HRGMv2_3834_39_7 8381 8578 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3834_39 HRGMv2_3834_39_8 9396 10463 + 3.A.1.34.1
TC HRGMv2_3834_39 HRGMv2_3834_39_9 10460 11371 + 3.A.1.34.1
TC HRGMv2_3834_39 HRGMv2_3834_39_10 11368 12231 + 3.A.1.34.1
Gene ID: HRGMv2_3834_39_1
Type: CAZyme
Location: 3 - 1151 (+)
Gene ID: HRGMv2_3834_39_2
Type: CAZyme
Location: 1236 - 3551 (+)
Gene ID: HRGMv2_3834_39_3
Type: pfam
Location: 3685 - 4824 (-)
Gene ID: HRGMv2_3834_39_4
Type: CAZyme
Location: 4947 - 6518 (+)
Gene ID: HRGMv2_3834_39_5
Type: pfam
Location: 6552 - 7370 (+)
Gene ID: HRGMv2_3834_39_6
Type: TC
Location: 7403 - 8347 (-)
Gene ID: HRGMv2_3834_39_7
Type:
Location: 8381 - 8578 (-)
Gene ID: HRGMv2_3834_39_8
Type: TC
Location: 9396 - 10463 (+)
Gene ID: HRGMv2_3834_39_9
Type: TC
Location: 10460 - 11371 (+)
Gene ID: HRGMv2_3834_39_10
Type: TC
Location: 11368 - 12231 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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