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Cluster: HRGMv2_3834_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3834_11 HRGMv2_3834_11_10 10285 14148 - 3.A.1.106.12
TF HRGMv2_3834_11 HRGMv2_3834_11_11 14454 15491 + LacI
TC HRGMv2_3834_11 HRGMv2_3834_11_12 15534 16427 - 3.A.1.1.48
TC HRGMv2_3834_11 HRGMv2_3834_11_13 16429 17343 - 3.A.1.1.48
STP HRGMv2_3834_11 HRGMv2_3834_11_14 17406 18794 - SBP_bac_1
CAZyme HRGMv2_3834_11 HRGMv2_3834_11_15 18851 20269 - GH51_1
NULL(UNKNOWN) HRGMv2_3834_11 HRGMv2_3834_11_16 20260 20514 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3834_11 HRGMv2_3834_11_17 20759 22579 + 4.C.1.1.14
Gene ID: HRGMv2_3834_11_10
Type: TC
Location: 10285 - 14148 (-)
Gene ID: HRGMv2_3834_11_11
Type: TF
Location: 14454 - 15491 (+)
Gene ID: HRGMv2_3834_11_12
Type: TC
Location: 15534 - 16427 (-)
Gene ID: HRGMv2_3834_11_13
Type: TC
Location: 16429 - 17343 (-)
Gene ID: HRGMv2_3834_11_14
Type: STP
Location: 17406 - 18794 (-)
Gene ID: HRGMv2_3834_11_15
Type: CAZyme
Location: 18851 - 20269 (-)
Gene ID: HRGMv2_3834_11_16
Type:
Location: 20260 - 20514 (-)
Gene ID: HRGMv2_3834_11_17
Type: TC
Location: 20759 - 22579 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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