Cluster: HRGMv2_3833_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3833
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3833_11 | HRGMv2_3833_11_50 | 56029 | 57114 | + | 9.B.146.1.6 |
| pfam | HRGMv2_3833_11 | HRGMv2_3833_11_51 | 57096 | 58568 | + | Mur_ligase_C | Mur_ligase_M |
| TC | HRGMv2_3833_11 | HRGMv2_3833_11_52 | 58561 | 59832 | + | 2.A.103.1.3 |
| CAZyme | HRGMv2_3833_11 | HRGMv2_3833_11_53 | 59836 | 60942 | + | GT28 |
Gene ID: HRGMv2_3833_11_50
Type: TC
Location: 56029 - 57114 (+)
Type: TC
Location: 56029 - 57114 (+)
Gene ID: HRGMv2_3833_11_51
Type: pfam
Location: 57096 - 58568 (+)
Type: pfam
Location: 57096 - 58568 (+)
Gene ID: HRGMv2_3833_11_52
Type: TC
Location: 58561 - 59832 (+)
Type: TC
Location: 58561 - 59832 (+)
Gene ID: HRGMv2_3833_11_53
Type: CAZyme
Location: 59836 - 60942 (+)
Type: CAZyme
Location: 59836 - 60942 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Peptidiphaga
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.